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Found 4585 results for class "Irradiation". Showing entries 1-20.

Graph Cluster Transcripts Mean logCPM Classification Smed/Human type Human gene Annotation
1. MligTC454_47310 Mlig001299.g18 9.83

 Irradiation 

 Int S/G2/M 

 S/G2/M, no gonads 

 Neoblast 

 Neoblast, stringent 

X1 PPID Mlig001299.g18 {REF} {Length: 3764} {Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [PF00160.21, score=162.0]} {Human: ENSG00000171497, PPID, peptidylprolyl isomerase D, [RH, Score=220, Expect=3e-71]} {Mouse: ENSMUSG00000027804, Ppid, peptidylprolyl isomerase D (cyclophilin D), [RH, Score=223, Expect=1e-72]} {Dmel: FBgn0004432, Cyp1, Cyclophilin 1, [Score=226, Expect=8e-76]} {Celegans: WBGene00000879, cyn-3, Peptidyl-prolyl cis-trans isomerase 3, [RH, Score=257, Expect=8e-89]} {Smed: dd_Smed_v6_1508_0_1, dd_Smed_v6_1508_0_1, [RH, Score=245, Expect=2e-84]} {RNA1509_18805, RNA1509_235, RNA1509_728} {SMEDTYPE: X1 [raj_facs_types]}
2. MligTC454_59553 Mlig022465.g5 9.12

 Irradiation 

 Int S/G2/M 

 Germline 

WBP2NL Mlig022465.g5 {REF} {Length: 1670} {Human: ENSG00000183066, WBP2NL, WBP2 N-terminal like, [RH, Score=54.7, Expect=3e-08]} {Mouse: ENSMUSG00000022455, Wbp2nl, WBP2 N-terminal like, [Score=59.3, Expect=1e-09]} {RNA1509_1798, RNA1509_2178, RNA1509_47, RNA1509_48, RNA1509_51669, RNA1509_7956}
3. MligTC454_55611 Mlig018268.g2, Mlig051606.g2 8.99

 Irradiation 

Mlig018268.g2 {REF} {Length: 557} {NoTransDecoderORF} {RNA1509_30}

Mlig051606.g2 {REF} {Length: 1278} {RNA1509_37248}
4. MligTC454_55511 Mlig020807.g2 8.93

 Irradiation 

 Int S/G2/M 

 Germline 

Epidermis I; Xins; Asexual_biased Mlig020807.g2 {REF} {Length: 2695} {Pfam: Immunoglobulin domain [PF13927.6, score=48.4]; Immunoglobulin I-set domain [PF07679.16, score=43.5]; Immunoglobulin domain [PF13895.6, score=34.1]; Immunoglobulin domain [PF00047.25, score=28.5]; Immunoglobulin V-set domain [PF07686.17, score=28.3]} {Smed: dd_Smed_v6_2673_0_1, dd_Smed_v6_2673_0_1, [Score=63.9, Expect=2e-10]} {RNA1509_15245, RNA1509_3600, RNA1509_390, RNA1509_42, RNA1509_43026, RNA1509_95} {SMEDTYPE: Epidermis I [dd_Smed_v6_2673_0_1, contactin 2 (axonal) (CNTN2)]} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.293672.0]}
5. MligTC454_55401 Mlig011207.g6 8.87

 Irradiation 

X1 HSPB1 Mlig011207.g6 {REF} {Length: 1304} {Pfam: Hsp20/alpha crystallin family [PF00011.21, score=96.9]; HSP20-like domain found in ArsA [PF17886.1, score=35.8]} {Human: ENSG00000106211, HSPB1, heat shock protein family B (small) member 1, [RH, Score=55.8, Expect=7e-09]} {Mouse: ENSMUSG00000004951, Hspb1, heat shock protein 1, [RH, Score=52.0, Expect=1e-07]} {Dmel: FBgn0031037, CG14207, [RH, Score=64.7, Expect=2e-12]} {Celegans: WBGene00002023, hsp-25, Heat Shock Protein, [RH, Score=72.0, Expect=6e-15]} {Smed: dd_Smed_v6_1039_0_1, dd_Smed_v6_1039_0_1, [RH, Score=96.7, Expect=1e-23]} {RNA1509_143, RNA1509_1512, RNA1509_20353, RNA1509_28963, RNA1509_3586, RNA1509_4347} {SMEDTYPE: X1 [raj_facs_types]}
6. MligTC454_36232 Mlig029904.g1 8.72

 Irradiation 

Mlig029904.g1 {REF} {Length: 1353} {Pfam: Kazal-type serine protease inhibitor domain [PF07648.15, score=22.6]; Kazal-type serine protease inhibitor domain [PF00050.21, score=20.2]} {RNA1509_1153, RNA1509_119, RNA1509_132, RNA1509_2899, RNA1509_4374, RNA1509_493, RNA1509_5617, RNA1509_6040, RNA1509_8295}
7. MligTC454_37725 Mlig002525.g4 8.48

 Irradiation 

 Int S/G2/M 

 Germline 

Mlig002525.g4 {REF} {Length: 1501} {RNA1509_318, RNA1509_361, RNA1509_3936}
8. MligTC454_34389 Mlig030334.g5 8.41

 Irradiation 

Mlig030334.g5 {REF} {Length: 1365} {RNA1509_12334, RNA1509_14264, RNA1509_15, RNA1509_16104, RNA1509_45044}
9. MligTC454_36836 Mlig028529.g3 8.18

 Irradiation 

Mlig028529.g3 {REF} {Length: 884} {Pfam: EF-hand domain [PF13405.6, score=28.2]; EF hand [PF00036.32, score=26.3]; EF hand [PF13202.6, score=24.3]; EF-hand domain pair [PF13499.6, score=23.3]} {RNA1509_194, RNA1509_2542, RNA1509_298, RNA1509_3622, RNA1509_5624}
10. MligTC454_60883 Mlig025073.g1 8.1

 Irradiation 

 Int S/G2/M 

 S/G2/M, no gonads 

 Neoblast 

 Neoblast, stringent 

X1; Asexual_biased HMGB1 Mlig025073.g1 {REF} {Length: 1388} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.19, score=123.4]; HMG-box domain [PF09011.10, score=114.1]} {Human: ENSG00000189403, HMGB1, high mobility group box 1, [RH, Score=169, Expect=1e-52]; ENSG00000164104, HMGB2, high mobility group box 2, [RH, Score=169, Expect=9e-53]} {Mouse: ENSMUSG00000066551, Hmgb1, high mobility group box 1, [RH, Score=169, Expect=6e-53]; ENSMUSG00000054717, Hmgb2, high mobility group box 2, [RH, Score=167, Expect=4e-52]} {Dmel: FBgn0278608, Dsp1, Dorsal switch protein 1, [RH, Score=202, Expect=5e-64]} {Celegans: WBGene00001972, hmg-1.2, High mobility group protein 1.2, [RH, Score=150, Expect=2e-45]} {Smed: dd_Smed_v6_1331_0_1, dd_Smed_v6_1331_0_1, [RH, Score=228, Expect=3e-75]} {RNA1509_10222, RNA1509_3665, RNA1509_38702, RNA1509_46651, RNA1509_50167, RNA1509_56240, RNA1509_57972, RNA1509_619, RNA1509_8003, RNA1509_8007} {SMEDTYPE: X1 [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.516811.0]}
11. MligTC454_57076 Mlig032789.g10 8.01

 Irradiation 

 Int S/G2/M 

 Germline 

 S/G2/M, no gonads 

X1 DDX6 Mlig032789.g10 {REF} {Length: 3243} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.29, score=147.1]; Helicase conserved C-terminal domain [PF00271.31, score=98.2]} {Human: ENSG00000110367, DDX6, DEAD-box helicase 6, [RH, Score=659, Expect=0.0]} {Mouse: ENSMUSG00000032097, Ddx6, DEAD (Asp-Glu-Ala-Asp) box polypeptide 6, [RH, Score=659, Expect=0.0]} {Dmel: FBgn0004419, me31B, maternal expression at 31B, [RH, Score=651, Expect=0.0]} {Celegans: WBGene00000479, cgh-1, ATP-dependent RNA helicase cgh-1, [RH, Score=641, Expect=0.0]} {Smed: dd_Smed_v6_1034_0_1, dd_Smed_v6_1034_0_1, [RH, Score=701, Expect=0.0]} {RNA1509_2093, RNA1509_85} {SMEDTYPE: X1 [raj_facs_types]}
12. MligTC454_59554 Mlig065844.g2 7.99

 Irradiation 

 Int S/G2/M 

 Germline 

WBP2NL Mlig065844.g2 {REF} {Length: 1752} {Human: ENSG00000183066, WBP2NL, WBP2 N-terminal like, [RH, Score=53.9, Expect=6e-08]} {Mouse: ENSMUSG00000022455, Wbp2nl, WBP2 N-terminal like, [Score=56.6, Expect=9e-09]} {RNA1509_11504, RNA1509_19310, RNA1509_35467, RNA1509_3933, RNA1509_4048, RNA1509_4521, RNA1509_48578, RNA1509_52628}
13. MligTC454_55716 Mlig032125.g25, Mlig015859.g1 7.96

 Irradiation 

Mlig032125.g25 {REF} {Length: 19} {NoTransDecoderORF}

Mlig015859.g1 {REF} {Length: 530} {TRANSSPLICED} {RNA1509_278, RNA1509_3406, RNA1509_651, RNA1509_9400}
14. MligTC454_67430 Mlig025254.g2 7.8

 Irradiation 

 Int S/G2/M 

 S/G2/M, no gonads 

 Neoblast 

 Neoblast, stringent 

X1 HSPD1 Mlig025254.g2 {REF} {Length: 2547} {TRANSSPLICED} {Pfam: TCP-1/cpn60 chaperonin family [PF00118.24, score=277.0]} {Human: ENSG00000144381, HSPD1, heat shock protein family D (Hsp60) member 1, [RH, Score=816, Expect=0.0]} {Mouse: ENSMUSG00000025980, Hspd1, heat shock protein 1 (chaperonin), [RH, Score=823, Expect=0.0]} {Dmel: FBgn0015245, Hsp60A, Heat shock protein 60A, [RH, Score=830, Expect=0.0]} {Celegans: WBGene00002025, hsp-60, Chaperonin homolog Hsp-60, mitochondrial, [RH, Score=743, Expect=0.0]} {Smed: dd_Smed_v6_141_0_1, dd_Smed_v6_141_0_1, [RH, Score=849, Expect=0.0]} {RNA1509_11210, RNA1509_1240, RNA1509_20002, RNA1509_5061, RNA1509_625} {SMEDTYPE: X1 [raj_facs_types]}
15. MligTC454_72998 Mlig056811.g1, Mlig041466.g1, Mlig059796.g1, Mlig001367.g16 7.79

 Irradiation 

 Int S/G2/M 

 S/G2/M, no gonads 

 Neoblast 

 Neoblast, stringent 

X1; Sexual_biased NAP1L4; NYNRIN

Mlig056811.g1 {REF} {Length: 2804} {Pfam: Integrase core domain [PF00665.26, score=77.9]; Integrase zinc binding domain [PF17921.1, score=53.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.27, score=51.3]; gag-polyprotein putative aspartyl protease [PF13975.6, score=38.0]; Aspartyl protease [PF13650.6, score=25.3]; Integrase core domain [PF13683.6, score=19.7]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=131, Expect=4e-31]} {SMEDTYPE: X1 [raj_facs_types]}

Mlig041466.g1 {REF} {Length: 1760} {Pfam: Integrase zinc binding domain [PF17921.1, score=54.7]; Integrase core domain [PF00665.26, score=31.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.27, score=28.3]; gag-polyprotein putative aspartyl protease [PF13975.6, score=22.7]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=52.8, Expect=2e-06]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=51.6, Expect=3e-06]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [Score=67.8, Expect=6e-12]}

Mlig059796.g1 {REF} {Length: 2075} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.27, score=55.1]; gag-polyprotein putative aspartyl protease [PF13975.6, score=35.2]; Aspartyl protease [PF13650.6, score=22.9]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=130, Expect=4e-31]} {SMEDTYPE: X1 [raj_facs_types]}

Mlig001367.g16 {REF} {Length: 1912} {TRANSSPLICED} {Pfam: Nucleosome assembly protein (NAP) [PF00956.18, score=314.3]} {Human: ENSG00000273562, NAP1L4, nucleosome assembly protein 1 like 4, [Score=271, Expect=7e-88]; ENSG00000205531, NAP1L4, nucleosome assembly protein 1 like 4, [Score=271, Expect=7e-88]; ENSG00000187109, NAP1L1, nucleosome assembly protein 1 like 1, [Score=270, Expect=3e-87]} {Mouse: ENSMUSG00000059119, Nap1l4, nucleosome assembly protein 1-like 4, [Score=280, Expect=2e-91]; ENSMUSG00000058799, Nap1l1, nucleosome assembly protein 1-like 1, [Score=270, Expect=2e-87]} {Dmel: FBgn0015268, Nap1, Nucleosome assembly protein 1, [Score=255, Expect=4e-82]} {Celegans: WBGene00017075, nap-1, Nucleosome Assembly Protein, [Score=197, Expect=5e-60]} {Smed: dd_Smed_v6_997_0_1, dd_Smed_v6_997_0_1, [Score=289, Expect=2e-95]} {RNA1509_320} {SMEDTYPE: Sexual_biased [CUFF.178729.0]}
16. MligTC454_41354 Mlig021163.g5 7.79

 Irradiation 

 Int S/G2/M 

 S/G2/M, no gonads 

 Neoblast 

 Neoblast, stringent 

Mlig021163.g5 {REF} {Length: 1683} {TRANSSPLICED} {RNA1509_12362, RNA1509_21074, RNA1509_37608, RNA1509_490, RNA1509_50533, RNA1509_5748}
17. MligTC454_46954 Mlig026266.g1 7.75

 Irradiation 

Xins LLGL2 Mlig026266.g1 {REF} {Length: 5335} {TRANSSPLICED} {Pfam: LLGL2 [PF08366.13, score=70.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.7, score=30.8]} {Human: ENSG00000073350, LLGL2, LLGL2, scribble cell polarity complex component, [RH, Score=272, Expect=3e-75]} {Mouse: ENSMUSG00000020782, Llgl2, LLGL2 scribble cell polarity complex component, [RH, Score=271, Expect=9e-75]} {Dmel: FBgn0002121, l(2)gl, lethal (2) giant larvae, [RH, Score=199, Expect=1e-51]} {Celegans: WBGene00006594, tom-1, TOM-1 isoform E; TOMosyn synaptic protein, [Score=135, Expect=1e-31]} {Smed: dd_Smed_v6_7127_0_1, dd_Smed_v6_7127_0_1, [RH, Score=149, Expect=2e-36]} {RNA1509_397} {SMEDTYPE: Xins [raj_facs_types]}
18. MligTC454_35243 Mlig015955.g1 7.73

 Irradiation 

 Int S/G2/M 

Mlig015955.g1 {REF} {Length: 338} {NoTransDecoderORF} {RNA1509_14976}
19. MligTC454_36430 Mlig026050.g2 7.72

 Irradiation 

Mlig026050.g2 {REF} {Length: 1320} {RNA1509_2349, RNA1509_2757, RNA1509_3926, RNA1509_5702}
20. MligTC454_58252 Mlig002753.g1 7.56

 Irradiation 

 Int S/G2/M 

 S/G2/M, no gonads 

 Neoblast 

 Neoblast, stringent 

NCL Mlig002753.g1 {REF} {Length: 3180} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.22, score=76.0]} {Human: ENSG00000115053, NCL, nucleolin, [Score=50.4, Expect=5e-06]} {Mouse: ENSMUSG00000026234, Ncl, nucleolin, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_8569_0_1, dd_Smed_v6_8569_0_1, [RH, Score=59.7, Expect=4e-09]} {RNA1509_39706, RNA1509_4263, RNA1509_52549, RNA1509_831}
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