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Found 1942 results for class "Germline". Showing entries 1-20.

Graph Cluster Transcripts Mean logCPM Classification Smed/Human type Human gene Annotation
1. MligTC454_43454 Mlig023254.g1 10.38

 Int S/G2/M 

 Germline 

 S/G2/M, no gonads 

X1 HSP90AA1 Mlig023254.g1 {REF} {Length: 3174} {Pfam: Hsp90 protein [PF00183.18, score=778.2]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.26, score=56.1]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.6, score=40.4]} {Human: ENSG00000080824, HSP90AA1, heat shock protein 90 alpha family class A member 1, [RH, Score=1074, Expect=0.0]; ENSG00000096384, HSP90AB1, heat shock protein 90 alpha family class B member 1, [RH, Score=1058, Expect=0.0]} {Mouse: ENSMUSG00000021270, Hsp90aa1, heat shock protein 90, alpha (cytosolic), class A member 1, [RH, Score=1088, Expect=0.0]; ENSMUSG00000023944, Hsp90ab1, heat shock protein 90 alpha (cytosolic), class B member 1, [RH, Score=1064, Expect=0.0]} {Dmel: FBgn0001233, Hsp83, Heat shock protein 83, [RH, Score=1101, Expect=0.0]} {Celegans: WBGene00000915, daf-21, Heat shock protein 90, [RH, Score=1035, Expect=0.0]} {Smed: dd_Smed_v6_56_0_2, dd_Smed_v6_56_0_2, [RH, Score=1131, Expect=0.0]} {RNA1509_125, RNA1509_806, RNA1509_874} {SMEDTYPE: X1 [raj_facs_types]}
2. MligTC454_43455 Mlig023254.g4 9.71

 Int S/G2/M 

 Germline 

 S/G2/M, no gonads 

X1 HSP90AA1 Mlig023254.g4 {REF} {Length: 3248} {Pfam: Hsp90 protein [PF00183.18, score=778.2]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.26, score=56.1]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.6, score=40.4]} {Human: ENSG00000080824, HSP90AA1, heat shock protein 90 alpha family class A member 1, [RH, Score=1074, Expect=0.0]; ENSG00000096384, HSP90AB1, heat shock protein 90 alpha family class B member 1, [RH, Score=1058, Expect=0.0]} {Mouse: ENSMUSG00000021270, Hsp90aa1, heat shock protein 90, alpha (cytosolic), class A member 1, [RH, Score=1088, Expect=0.0]; ENSMUSG00000023944, Hsp90ab1, heat shock protein 90 alpha (cytosolic), class B member 1, [RH, Score=1064, Expect=0.0]} {Dmel: FBgn0001233, Hsp83, Heat shock protein 83, [RH, Score=1101, Expect=0.0]} {Celegans: WBGene00000915, daf-21, Heat shock protein 90, [RH, Score=1035, Expect=0.0]} {Smed: dd_Smed_v6_56_0_2, dd_Smed_v6_56_0_2, [RH, Score=1131, Expect=0.0]} {RNA1509_125, RNA1509_12816, RNA1509_175, RNA1509_2660, RNA1509_32, RNA1509_7931} {SMEDTYPE: X1 [raj_facs_types]}
3. MligTC454_41694 Mlig009946.g3 9.2

 Int S/G2/M 

 Germline 

 S/G2/M, no gonads 

Neoblast; X1; Sexual_biased PABPC4 Mlig009946.g3 {REF} {Length: 4043} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.22, score=282.3]; Poly-adenylate binding protein, unique domain [PF00658.18, score=106.6]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.6, score=41.7]; Nup53/35/40-type RNA recognition motif [PF14605.6, score=34.7]; RNA binding motif [PF08777.11, score=24.7]; Protein of unknown function (DUF4523) [PF15023.6, score=22.9]; RNA recognition motif [PF16367.5, score=21.8]; Occluded RNA-recognition motif [PF16842.5, score=19.6]} {Human: ENSG00000090621, PABPC4, poly(A) binding protein cytoplasmic 4, [RH, Score=736, Expect=0.0]; ENSG00000070756, PABPC1, poly(A) binding protein cytoplasmic 1, [RH, Score=715, Expect=0.0]} {Mouse: ENSMUSG00000011257, Pabpc4, poly(A) binding protein, cytoplasmic 4, [RH, Score=728, Expect=0.0]; ENSMUSG00000022283, Pabpc1, poly(A) binding protein, cytoplasmic 1, [RH, Score=715, Expect=0.0]} {Dmel: FBgn0265297, pAbp, poly(A) binding protein, [RH, Score=671, Expect=0.0]} {Celegans: WBGene00003902, pab-1, Polyadenylate-binding protein, [RH, Score=664, Expect=0.0]} {Smed: dd_Smed_v6_11729_0_1, dd_Smed_v6_11729_0_1, [RH, Score=724, Expect=0.0]} {RNA1509_10073, RNA1509_114, RNA1509_1179, RNA1509_1771, RNA1509_18204, RNA1509_18216, RNA1509_2105, RNA1509_24526, RNA1509_25464, RNA1509_29669, RNA1509_3171, RNA1509_6222, RNA1509_8584} {SMEDTYPE: Neoblast [dd_Smed_v6_11729_0_1, cytoplasmic poly(A) binding protein (PABPC)]} {SMEDTYPE: X1 [raj_facs_types]} {SMEDTYPE: Sexual_biased [CUFF.36071.0]}
4. MligTC454_59553 Mlig022465.g5 9.12

 Irradiation 

 Int S/G2/M 

 Germline 

WBP2NL Mlig022465.g5 {REF} {Length: 1670} {Human: ENSG00000183066, WBP2NL, WBP2 N-terminal like, [RH, Score=54.7, Expect=3e-08]} {Mouse: ENSMUSG00000022455, Wbp2nl, WBP2 N-terminal like, [Score=59.3, Expect=1e-09]} {RNA1509_1798, RNA1509_2178, RNA1509_47, RNA1509_48, RNA1509_51669, RNA1509_7956}
5. MligTC454_55511 Mlig020807.g2 8.93

 Irradiation 

 Int S/G2/M 

 Germline 

Epidermis I; Xins; Asexual_biased Mlig020807.g2 {REF} {Length: 2695} {Pfam: Immunoglobulin domain [PF13927.6, score=48.4]; Immunoglobulin I-set domain [PF07679.16, score=43.5]; Immunoglobulin domain [PF13895.6, score=34.1]; Immunoglobulin domain [PF00047.25, score=28.5]; Immunoglobulin V-set domain [PF07686.17, score=28.3]} {Smed: dd_Smed_v6_2673_0_1, dd_Smed_v6_2673_0_1, [Score=63.9, Expect=2e-10]} {RNA1509_15245, RNA1509_3600, RNA1509_390, RNA1509_42, RNA1509_43026, RNA1509_95} {SMEDTYPE: Epidermis I [dd_Smed_v6_2673_0_1, contactin 2 (axonal) (CNTN2)]} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.293672.0]}
6. MligTC454_37725 Mlig002525.g4 8.48

 Irradiation 

 Int S/G2/M 

 Germline 

Mlig002525.g4 {REF} {Length: 1501} {RNA1509_318, RNA1509_361, RNA1509_3936}
7. MligTC454_57837 Mlig011389.g3 8.45

 Int S/G2/M 

 Germline 

X2 P4HB Mlig011389.g3 {REF} {Length: 3269} {Pfam: Thioredoxin [PF00085.20, score=219.0]; Thioredoxin-like domain [PF13848.6, score=150.4]; Thioredoxin-like domain [PF13098.6, score=58.6]; Calsequestrin [PF01216.17, score=52.1]; Thioredoxin-like [PF13905.6, score=48.3]; OST3 / OST6 family, transporter family [PF04756.13, score=46.6]; ERp29, N-terminal domain [PF07912.13, score=42.6]; Thioredoxin-like [PF13899.6, score=42.0]; AhpC/TSA family [PF00578.21, score=36.3]; Redoxin [PF08534.10, score=31.2]; F plasmid transfer operon protein [PF13728.6, score=22.6]} {Human: ENSG00000185624, P4HB, prolyl 4-hydroxylase subunit beta, [RH, Score=572, Expect=0.0]} {Mouse: ENSMUSG00000025130, P4hb, prolyl 4-hydroxylase, beta polypeptide, [RH, Score=563, Expect=0.0]} {Dmel: FBgn0014002, Pdi, Protein disulfide isomerase, [RH, Score=510, Expect=3e-178]} {Celegans: WBGene00003963, pdi-2, Protein disulfide-isomerase 2, [RH, Score=565, Expect=0.0]} {Smed: dd_Smed_v6_250_0_1, dd_Smed_v6_250_0_1, [RH, Score=578, Expect=0.0]} {RNA1509_1575} {SMEDTYPE: X2 [raj_facs_types]}
8. MligTC454_57839 Mlig109732.g1 8.15

 Int S/G2/M 

 Germline 

X2 P4HB Mlig109732.g1 {REF} {Length: 3022} {Pfam: Thioredoxin-like domain [PF13848.6, score=55.2]; ERp29, N-terminal domain [PF07912.13, score=27.6]; Thioredoxin [PF00085.20, score=27.4]} {Human: ENSG00000185624, P4HB, prolyl 4-hydroxylase subunit beta, [Score=177, Expect=1e-55]} {Mouse: ENSMUSG00000025130, P4hb, prolyl 4-hydroxylase, beta polypeptide, [Score=176, Expect=4e-53]} {Dmel: FBgn0014002, Pdi, Protein disulfide isomerase, [Score=128, Expect=3e-35]} {Celegans: WBGene00003963, pdi-2, Protein disulfide-isomerase 2, [Score=184, Expect=6e-57]} {Smed: dd_Smed_v6_250_0_1, dd_Smed_v6_250_0_1, [Score=162, Expect=2e-48]} {RNA1509_1575} {SMEDTYPE: X2 [raj_facs_types]}
9. MligTC454_57076 Mlig032789.g10 8.01

 Irradiation 

 Int S/G2/M 

 Germline 

 S/G2/M, no gonads 

X1 DDX6 Mlig032789.g10 {REF} {Length: 3243} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.29, score=147.1]; Helicase conserved C-terminal domain [PF00271.31, score=98.2]} {Human: ENSG00000110367, DDX6, DEAD-box helicase 6, [RH, Score=659, Expect=0.0]} {Mouse: ENSMUSG00000032097, Ddx6, DEAD (Asp-Glu-Ala-Asp) box polypeptide 6, [RH, Score=659, Expect=0.0]} {Dmel: FBgn0004419, me31B, maternal expression at 31B, [RH, Score=651, Expect=0.0]} {Celegans: WBGene00000479, cgh-1, ATP-dependent RNA helicase cgh-1, [RH, Score=641, Expect=0.0]} {Smed: dd_Smed_v6_1034_0_1, dd_Smed_v6_1034_0_1, [RH, Score=701, Expect=0.0]} {RNA1509_2093, RNA1509_85} {SMEDTYPE: X1 [raj_facs_types]}
10. MligTC454_59554 Mlig065844.g2 7.99

 Irradiation 

 Int S/G2/M 

 Germline 

WBP2NL Mlig065844.g2 {REF} {Length: 1752} {Human: ENSG00000183066, WBP2NL, WBP2 N-terminal like, [RH, Score=53.9, Expect=6e-08]} {Mouse: ENSMUSG00000022455, Wbp2nl, WBP2 N-terminal like, [Score=56.6, Expect=9e-09]} {RNA1509_11504, RNA1509_19310, RNA1509_35467, RNA1509_3933, RNA1509_4048, RNA1509_4521, RNA1509_48578, RNA1509_52628}
11. MligTC454_55910 Mlig024523.g3 7.27

 Int S/G2/M 

 Germline 

X2; Sexual_biased HSP90B1 Mlig024523.g3 {REF} {Length: 4004} {Pfam: Hsp90 protein [PF00183.18, score=376.0]} {Human: ENSG00000166598, HSP90B1, heat shock protein 90 beta family member 1, [Score=360, Expect=2e-118]} {Mouse: ENSMUSG00000020048, Hsp90b1, heat shock protein 90, beta (Grp94), member 1, [Score=364, Expect=6e-120]} {Dmel: FBgn0039562, Gp93, Glycoprotein 93, [Score=322, Expect=6e-104]} {Celegans: WBGene00011480, enpl-1, Endoplasmin homolog, [Score=339, Expect=8e-112]} {Smed: dd_Smed_v6_758_1_1, dd_Smed_v6_758_1_1, [Score=351, Expect=2e-115]} {RNA1509_1985, RNA1509_4445, RNA1509_48304, RNA1509_48533, RNA1509_55621} {SMEDTYPE: X2 [raj_facs_types]} {SMEDTYPE: Sexual_biased [CUFF.9642.0]}
12. MligTC454_53107 Mlig011676.g2 7.08

 Irradiation 

 Int S/G2/M 

 Germline 

X1; Xins; self-renewal TUBB Mlig011676.g2 {REF} {Length: 2039} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.25, score=227.9]; Tubulin C-terminal domain [PF03953.17, score=147.5]; Misato Segment II tubulin-like domain [PF10644.9, score=24.5]} {Human: ENSG00000235067, TUBB, tubulin beta class I, [Score=766, Expect=0.0]; ENSG00000232575, TUBB, tubulin beta class I, [Score=766, Expect=0.0]; ENSG00000258947, TUBB3, tubulin beta 3 class III, [Score=766, Expect=0.0]; ENSG00000183311, TUBB, tubulin beta class I, [Score=766, Expect=0.0]; ENSG00000227739, TUBB, tubulin beta class I, [Score=766, Expect=0.0]; ENSG00000196230, TUBB, tubulin beta class I, [Score=766, Expect=0.0]; ENSG00000229684, TUBB, tubulin beta class I, [Score=766, Expect=0.0]; ENSG00000232421, TUBB, tubulin beta class I, [Score=766, Expect=0.0]; ENSG00000224156, TUBB, tubulin beta class I, [Score=766, Expect=0.0]; ENSG00000137285, TUBB2B, tubulin beta 2B class IIb, [Score=764, Expect=0.0]; ENSG00000188229, TUBB4B, tubulin beta 4B class IVb, [Score=764, Expect=0.0]; ENSG00000137267, TUBB2A, tubulin beta 2A class IIa, [Score=759, Expect=0.0]; ENSG00000104833, TUBB4A, tubulin beta 4A class IVa, [Score=756, Expect=0.0]; ENSG00000176014, TUBB6, tubulin beta 6 class V, [Score=731, Expect=0.0]; ENSG00000198211, AC092143.1, novel protein (MC1R-TUBB3 readthrough), [Score=730, Expect=0.0]; ENSG00000261456, TUBB8, tubulin beta 8 class VIII, [Score=728, Expect=0.0]} {Mouse: ENSMUSG00000001525, Tubb5, tubulin, beta 5 class I, [Score=766, Expect=0.0]; ENSMUSG00000045136, Tubb2b, tubulin, beta 2B class IIB, [Score=764, Expect=0.0]; ENSMUSG00000062380, Tubb3, tubulin, beta 3 class III, [Score=764, Expect=0.0]; ENSMUSG00000036752, Tubb4b, tubulin, beta 4B class IVB, [Score=764, Expect=0.0]; ENSMUSG00000058672, Tubb2a, tubulin, beta 2A class IIA, [Score=759, Expect=0.0]; ENSMUSG00000062591, Tubb4a, tubulin, beta 4A class IVA, [Score=756, Expect=0.0]; ENSMUSG00000001473, Tubb6, tubulin, beta 6 class V, [Score=731, Expect=0.0]} {Dmel: FBgn0003888, betaTub60D, beta-Tubulin at 60D, [Score=751, Expect=0.0]} {Celegans: WBGene00006537, tbb-2, Tubulin beta-2 chain, [Score=752, Expect=0.0]} {Smed: dd_Smed_v6_83_0_1, dd_Smed_v6_83_0_1, [Score=771, Expect=0.0]} {RNA1509_44} {SMEDTYPE: X1; Xins [raj_facs_types]} {SMEDTYPE: self-renewal [4]}
13. MligTC454_53065 Mlig033002.g2 7.08

 Irradiation 

 Int S/G2/M 

 Germline 

Mlig033002.g2 {REF} {Length: 769} {RNA1509_17718, RNA1509_1781, RNA1509_26294, RNA1509_34070, RNA1509_4375, RNA1509_8024}
14. MligTC454_26746 Mlig027481.g5 6.94

 Irradiation 

 Int S/G2/M 

 Germline 

Sexual_biased TTL Mlig027481.g5 {REF} {Length: 4033} {Pfam: Tubulin-tyrosine ligase family [PF03133.15, score=78.7]; YheC/D like ATP-grasp [PF14398.6, score=43.7]} {Human: ENSG00000114999, TTL, tubulin tyrosine ligase, [Score=59.3, Expect=1e-08]} {Mouse: ENSMUSG00000029074, Ttll10, tubulin tyrosine ligase-like family, member 10, [Score=86.3, Expect=9e-17]} {Dmel: FBgn0030823, CG8918, [Score=65.5, Expect=1e-10]} {Smed: dd_Smed_v6_9664_0_1, dd_Smed_v6_9664_0_1, [Score=80.1, Expect=3e-15]} {RNA1509_14687, RNA1509_151, RNA1509_1576, RNA1509_16971, RNA1509_2185, RNA1509_26439, RNA1509_2713, RNA1509_5565, RNA1509_7036, RNA1509_897} {SMEDTYPE: Sexual_biased [CUFF.163487.0]}
15. MligTC454_57075 Mlig032789.g1 6.88

 Irradiation 

 Int S/G2/M 

 Germline 

X1 DDX6 Mlig032789.g1 {REF} {Length: 3239} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.29, score=147.1]; Helicase conserved C-terminal domain [PF00271.31, score=98.2]} {Human: ENSG00000110367, DDX6, DEAD-box helicase 6, [RH, Score=659, Expect=0.0]} {Mouse: ENSMUSG00000032097, Ddx6, DEAD (Asp-Glu-Ala-Asp) box polypeptide 6, [RH, Score=659, Expect=0.0]} {Dmel: FBgn0004419, me31B, maternal expression at 31B, [RH, Score=651, Expect=0.0]} {Celegans: WBGene00000479, cgh-1, ATP-dependent RNA helicase cgh-1, [RH, Score=641, Expect=0.0]} {Smed: dd_Smed_v6_1034_0_1, dd_Smed_v6_1034_0_1, [RH, Score=701, Expect=0.0]} {RNA1509_16545, RNA1509_2093} {SMEDTYPE: X1 [raj_facs_types]}
16. MligTC454_32355 Mlig013339.g3, Mlig024920.g2 6.76

 Int S/G2/M 

 Germline 

X1 PURB

Mlig013339.g3 {REF} {Length: 2243} {TRANSSPLICED} {Pfam: PurA ssDNA and RNA-binding protein [PF04845.13, score=259.7]; Protein of unknown function (DUF3276) [PF11680.8, score=27.1]} {Human: ENSG00000146676, PURB, purine rich element binding protein B, [Score=179, Expect=5e-54]; ENSG00000185129, PURA, purine rich element binding protein A, [Score=171, Expect=1e-50]} {Mouse: ENSMUSG00000094483, Purb, purine rich element binding protein B, [Score=179, Expect=4e-54]; ENSMUSG00000043991, Pura, purine rich element binding protein A, [Score=171, Expect=9e-51]} {Dmel: FBgn0022361, Pur-alpha, Purine-rich binding protein-alpha, [Score=214, Expect=2e-68]} {Celegans: WBGene00004046, plp-1, Pur alpha Like Protein, [Score=125, Expect=2e-34]} {Smed: dd_Smed_v6_346_0_1, dd_Smed_v6_346_0_1, [Score=207, Expect=2e-66]} {RNA1509_44271, RNA1509_6540} {SMEDTYPE: X1 [raj_facs_types]}

Mlig024920.g2 {REF} {Length: 2074} {TRANSSPLICED} {Pfam: PurA ssDNA and RNA-binding protein [PF04845.13, score=272.4]; Protein of unknown function (DUF3276) [PF11680.8, score=26.8]} {Human: ENSG00000146676, PURB, purine rich element binding protein B, [RH, Score=191, Expect=2e-59]; ENSG00000185129, PURA, purine rich element binding protein A, [RH, Score=190, Expect=9e-59]} {Mouse: ENSMUSG00000094483, Purb, purine rich element binding protein B, [RH, Score=190, Expect=7e-59]; ENSMUSG00000043991, Pura, purine rich element binding protein A, [RH, Score=190, Expect=6e-59]} {Dmel: FBgn0022361, Pur-alpha, Purine-rich binding protein-alpha, [RH, Score=236, Expect=4e-78]} {Celegans: WBGene00004046, plp-1, Pur alpha Like Protein, [RH, Score=146, Expect=2e-43]} {Smed: dd_Smed_v6_346_0_1, dd_Smed_v6_346_0_1, [RH, Score=256, Expect=4e-86]} {RNA1509_43230, RNA1509_44271} {SMEDTYPE: X1 [raj_facs_types]}
17. MligTC454_61753 Mlig024559.g3 6.7

 Int S/G2/M 

 Germline 

Neural (non-ciliated); Xins; Asexual_biased ELAVL4 Mlig024559.g3 {REF} {Length: 1939} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.22, score=211.8]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.6, score=43.1]; Occluded RNA-recognition motif [PF16842.5, score=21.5]; RNA binding motif [PF08777.11, score=21.3]; Cytosolic domain of 10TM putative phosphate transporter [PF14703.6, score=19.0]} {Human: ENSG00000162374, ELAVL4, ELAV like RNA binding protein 4, [RH, Score=377, Expect=3e-129]; ENSG00000107105, ELAVL2, ELAV like RNA binding protein 2, [RH, Score=362, Expect=8e-124]} {Mouse: ENSMUSG00000028546, Elavl4, ELAV like RNA binding protein 4, [RH, Score=375, Expect=7e-129]; ENSMUSG00000008489, Elavl2, ELAV like RNA binding protein 1, [RH, Score=364, Expect=1e-124]; ENSMUSG00000003410, Elavl3, ELAV like RNA binding protein 3, [RH, Score=357, Expect=2e-121]} {Dmel: FBgn0010263, Rbp9, RNA-binding protein 9, [RH, Score=390, Expect=2e-130]} {Celegans: WBGene00001368, exc-7, [Score=232, Expect=4e-72]} {Smed: dd_Smed_v6_8376_0_1, dd_Smed_v6_8376_0_1, [RH, Score=261, Expect=3e-82]} {RNA1509_13279, RNA1509_16588, RNA1509_2056, RNA1509_226, RNA1509_3227, RNA1509_35023, RNA1509_4267, RNA1509_5511} {SMEDTYPE: Neural (non-ciliated) [dd_Smed_v6_8376_0_1, ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (ELAVL4)]} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.45991.0]}
18. MligTC454_31771 Mlig119434.g12 6.61

 Irradiation 

 Int S/G2/M 

 Germline 

Mlig119434.g12 {REF} {Length: 2220} {RNA1509_25356}
19. MligTC454_50658 Mlig032741.g2 6.55

 Irradiation 

 Int S/G2/M 

 Germline 

AC037482.3 Mlig032741.g2 {REF} {Length: 6859} {TRANSSPLICED} {Human: ENSG00000266286, AC037482.3, keratin-associated protein 4-7, [Score=44.7, Expect=7e-06]} {RNA1509_130, RNA1509_3956, RNA1509_489}
20. MligTC454_37350 Mlig066891.g1 6.43

 Irradiation 

 Int S/G2/M 

 Germline 

Mlig066891.g1 {REF} {Length: 905} {RNA1509_4613, RNA1509_994}
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