Text search

search Exact search

Found 579 results for log2(IntG2M/IntG1) between 0 and 1 and fdr <= 0.05. Showing entries 1-20.

Graph Cluster Transcripts Mean logCPM Classification Smed/Human type Human gene Annotation
1. MligTC454_36521 Mlig024586.g1, Mlig024586.g4 10.6

 Int S/G2/M 

X1 EEF2

Mlig024586.g1 {REF} {Length: 3237} {Pfam: Elongation factor Tu GTP binding domain [PF00009.27, score=215.4]; Elongation factor G, domain IV [PF03764.18, score=115.4]; Elongation factor G C-terminus [PF00679.24, score=81.9]; Elongation Factor G, domain II [PF14492.6, score=53.2]; Elongation factor Tu domain 2 [PF03144.25, score=33.5]; 50S ribosome-binding GTPase [PF01926.23, score=25.7]} {Human: ENSG00000167658, EEF2, eukaryotic translation elongation factor 2, [RH, Score=1309, Expect=0.0]} {Mouse: ENSMUSG00000034994, Eef2, eukaryotic translation elongation factor 2, [RH, Score=1310, Expect=0.0]} {Dmel: FBgn0000559, eEF2, eukaryotic translation elongation factor 2, [RH, Score=1307, Expect=0.0]} {Celegans: WBGene00001167, eef-2, Elongation factor 2, [RH, Score=1340, Expect=0.0]} {Smed: dd_Smed_v6_186_0_1, dd_Smed_v6_186_0_1, [RH, Score=1326, Expect=0.0]} {RNA1509_10935, RNA1509_28, RNA1509_29206, RNA1509_3535, RNA1509_46550} {SMEDTYPE: X1 [raj_facs_types]}

Mlig024586.g4 {REF} {Length: 3121} {Pfam: Elongation factor Tu GTP binding domain [PF00009.27, score=215.4]; Elongation factor G, domain IV [PF03764.18, score=115.4]; Elongation factor G C-terminus [PF00679.24, score=81.9]; Elongation Factor G, domain II [PF14492.6, score=53.2]; Elongation factor Tu domain 2 [PF03144.25, score=33.5]; 50S ribosome-binding GTPase [PF01926.23, score=25.7]} {Human: ENSG00000167658, EEF2, eukaryotic translation elongation factor 2, [RH, Score=1309, Expect=0.0]} {Mouse: ENSMUSG00000034994, Eef2, eukaryotic translation elongation factor 2, [RH, Score=1310, Expect=0.0]} {Dmel: FBgn0000559, eEF2, eukaryotic translation elongation factor 2, [RH, Score=1307, Expect=0.0]} {Celegans: WBGene00001167, eef-2, Elongation factor 2, [RH, Score=1340, Expect=0.0]} {Smed: dd_Smed_v6_186_0_1, dd_Smed_v6_186_0_1, [RH, Score=1326, Expect=0.0]} {RNA1509_28, RNA1509_35610} {SMEDTYPE: X1 [raj_facs_types]}
2. MligTC454_33945 Mlig031719.g1 10.22

 Int S/G2/M 

X1; Sexual_biased RPL3 Mlig031719.g1 {REF} {Length: 1407} {TRANSSPLICED} {Pfam: Ribosomal protein L3 [PF00297.22, score=601.0]} {Human: ENSG00000100316, RPL3, ribosomal protein L3, [RH, Score=649, Expect=0.0]} {Mouse: ENSMUSG00000060036, Rpl3, ribosomal protein L3, [RH, Score=648, Expect=0.0]} {Dmel: FBgn0020910, RpL3, Ribosomal protein L3, [RH, Score=638, Expect=0.0]} {Celegans: WBGene00004414, rpl-3, 60S ribosomal protein L3, [RH, Score=608, Expect=0.0]} {Smed: dd_Smed_v6_127_0_1, dd_Smed_v6_127_0_1, [RH, Score=596, Expect=0.0]} {RNA1509_1388, RNA1509_16343, RNA1509_2153, RNA1509_25626, RNA1509_4325, RNA1509_4415, RNA1509_4728, RNA1509_4856, RNA1509_78, RNA1509_8560} {SMEDTYPE: X1 [raj_facs_types]} {SMEDTYPE: Sexual_biased [CUFF.252008.0]}
3. MligTC454_53692 Mlig010745.g2 9.99

 Int S/G2/M 

Asexual_biased HSPA8 Mlig010745.g2 {REF} {Length: 2714} {Pfam: Hsp70 protein [PF00012.20, score=871.1]; MreB/Mbl protein [PF06723.13, score=63.1]; Cell division protein FtsA [PF14450.6, score=23.0]} {Human: ENSG00000109971, HSPA8, heat shock protein family A (Hsp70) member 8, [RH, Score=1140, Expect=0.0]} {Mouse: ENSMUSG00000015656, Hspa8, heat shock protein 8, [RH, Score=1141, Expect=0.0]; ENSMUSG00000007033, Hspa1l, heat shock protein 1-like, [RH, Score=1084, Expect=0.0]} {Dmel: FBgn0266599, Hsc70-4, Heat shock protein cognate 4, [RH, Score=1093, Expect=0.0]} {Celegans: WBGene00002005, hsp-1, Heat shock 70 kDa protein A, [RH, Score=1078, Expect=0.0]} {Smed: dd_Smed_v6_15_0_1, dd_Smed_v6_15_0_1, [RH, Score=1158, Expect=0.0]} {RNA1509_17} {SMEDTYPE: Asexual_biased [CUFF.501819.0]}
4. MligTC454_47310 Mlig001299.g18 9.83

 Irradiation 

 Int S/G2/M 

 S/G2/M, no gonads 

 Neoblast 

 Neoblast, stringent 

X1 PPID Mlig001299.g18 {REF} {Length: 3764} {Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [PF00160.21, score=162.0]} {Human: ENSG00000171497, PPID, peptidylprolyl isomerase D, [RH, Score=220, Expect=3e-71]} {Mouse: ENSMUSG00000027804, Ppid, peptidylprolyl isomerase D (cyclophilin D), [RH, Score=223, Expect=1e-72]} {Dmel: FBgn0004432, Cyp1, Cyclophilin 1, [Score=226, Expect=8e-76]} {Celegans: WBGene00000879, cyn-3, Peptidyl-prolyl cis-trans isomerase 3, [RH, Score=257, Expect=8e-89]} {Smed: dd_Smed_v6_1508_0_1, dd_Smed_v6_1508_0_1, [RH, Score=245, Expect=2e-84]} {RNA1509_18805, RNA1509_235, RNA1509_728} {SMEDTYPE: X1 [raj_facs_types]}
5. MligTC454_36440 Mlig027547.g4 9.61

 Int S/G2/M 

X1 RPL13A Mlig027547.g4 {REF} {Length: 778} {TRANSSPLICED} {Pfam: Ribosomal protein L13 [PF00572.18, score=44.8]} {Human: ENSG00000142541, RPL13A, ribosomal protein L13a, [RH, Score=266, Expect=5e-91]} {Mouse: ENSMUSG00000074129, Rpl13a, ribosomal protein L13A, [RH, Score=260, Expect=8e-89]; ENSMUSG00000089989, Gm45713, predicted gene 45713, [RH, Score=259, Expect=4e-85]} {Dmel: FBgn0037351, RpL13A, Ribosomal protein L13A, [RH, Score=231, Expect=2e-77]} {Celegans: WBGene00004428, rpl-16, 60S ribosomal protein L13a, [RH, Score=224, Expect=7e-75]} {Smed: dd_Smed_v6_287_0_1, dd_Smed_v6_287_0_1, [RH, Score=270, Expect=3e-93]} {RNA1509_1323, RNA1509_1326, RNA1509_2265, RNA1509_5049, RNA1509_58273, RNA1509_9958} {SMEDTYPE: X1 [raj_facs_types]}
6. MligTC454_47710 Mlig022192.g3 9.6

 Int S/G2/M 

 S/G2/M, no gonads 

 Neoblast 

Testis TUBA1A Mlig022192.g3 {REF} {Length: 4566} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.25, score=230.3]; Tubulin C-terminal domain [PF03953.17, score=175.7]; Tubulin domain [PF14881.6, score=18.9]} {Human: ENSG00000167552, TUBA1A, tubulin alpha 1a, [RH, Score=934, Expect=0.0]; ENSG00000123416, TUBA1B, tubulin alpha 1b, [RH, Score=932, Expect=0.0]; ENSG00000075886, TUBA3D, tubulin alpha 3d, [RH, Score=924, Expect=0.0]; ENSG00000198033, TUBA3C, tubulin alpha 3c, [RH, Score=924, Expect=0.0]; ENSG00000152086, TUBA3E, tubulin alpha 3e, [RH, Score=908, Expect=0.0]; ENSG00000167553, TUBA1C, tubulin alpha 1c, [RH, Score=891, Expect=0.0]} {Mouse: ENSMUSG00000072235, Tuba1a, tubulin, alpha 1A, [RH, Score=934, Expect=0.0]; ENSMUSG00000023004, Tuba1b, tubulin, alpha 1B, [RH, Score=932, Expect=0.0]; ENSMUSG00000067702, Tuba3a, tubulin, alpha 3A, [RH, Score=924, Expect=0.0]; ENSMUSG00000067338, Tuba3b, tubulin, alpha 3B, [RH, Score=924, Expect=0.0]; ENSMUSG00000043091, Tuba1c, tubulin, alpha 1C, [RH, Score=917, Expect=0.0]} {Dmel: FBgn0003884, alphaTub84B, alpha-Tubulin at 84B, [RH, Score=922, Expect=0.0]} {Celegans: WBGene00003175, mec-12, Tubulin alpha-3 chain Detyrosinated tubulin alpha-3 chain, [RH, Score=855, Expect=0.0]} {Smed: dd_Smed_v6_10947_0_2, dd_Smed_v6_10947_0_2, [RH, Score=931, Expect=0.0]} {RNA1509_14345, RNA1509_18582, RNA1509_19570, RNA1509_20252, RNA1509_21961, RNA1509_23914, RNA1509_27167, RNA1509_28568, RNA1509_29822, RNA1509_34072, RNA1509_3666, RNA1509_44848, RNA1509_48580, RNA1509_49157, RNA1509_49910, RNA1509_50038, RNA1509_55307, RNA1509_58756, RNA1509_860} {SMEDTYPE: Testis [Contig7537_SE3]}
7. MligTC454_63105 Mlig113567.g1 9.49

 Int S/G2/M 

Neoblast; X1; Sexual_biased YWHAZ Mlig113567.g1 {REF} {Length: 2261} {Pfam: 14-3-3 protein [PF00244.20, score=345.5]} {Human: ENSG00000164924, YWHAZ, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta, [RH, Score=356, Expect=6e-125]; ENSG00000166913, YWHAB, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta, [RH, Score=355, Expect=7e-125]; ENSG00000134308, YWHAQ, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta, [RH, Score=347, Expect=1e-121]; ENSG00000170027, YWHAG, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma, [RH, Score=340, Expect=1e-118]} {Mouse: ENSMUSG00000022285, Ywhaz, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide, [RH, Score=355, Expect=7e-125]; ENSMUSG00000018326, Ywhab, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide, [RH, Score=353, Expect=3e-124]; ENSMUSG00000076432, Ywhaq, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta, [RH, Score=345, Expect=4e-121]; ENSMUSG00000051391, Ywhag, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide, [RH, Score=340, Expect=8e-119]} {Dmel: FBgn0004907, 14-3-3zeta, [RH, Score=360, Expect=7e-127]} {Celegans: WBGene00001502, ftt-2, 14-3-3-like protein 2, [RH, Score=354, Expect=1e-124]} {Smed: dd_Smed_v6_5419_0_1, dd_Smed_v6_5419_0_1, [RH, Score=366, Expect=3e-129]} {RNA1509_100, RNA1509_15126} {SMEDTYPE: Neoblast [dd_Smed_v6_5419_0_1, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide (YWHAB)]} {SMEDTYPE: X1 [raj_facs_types]} {SMEDTYPE: Sexual_biased [CUFF.219670.0]}
8. MligTC454_58153 Mlig012955.g1, Mlig078418.g1 9.37

 Int S/G2/M 

X1 EEF1G

Mlig012955.g1 {REF} {Length: 1471} {TRANSSPLICED} {Pfam: Elongation factor 1 gamma, conserved domain [PF00647.19, score=160.6]; Glutathione S-transferase, C-terminal domain [PF00043.25, score=46.1]; Glutathione S-transferase, N-terminal domain [PF02798.20, score=33.9]; Glutathione S-transferase, C-terminal domain [PF13410.6, score=32.2]; Glutathione S-transferase, C-terminal domain [PF14497.6, score=24.0]} {Human: ENSG00000254772, EEF1G, eukaryotic translation elongation factor 1 gamma, [RH, Score=379, Expect=2e-128]} {Mouse: ENSMUSG00000071644, Eef1g, eukaryotic translation elongation factor 1 gamma, [RH, Score=378, Expect=3e-128]} {Dmel: FBgn0029176, eEF1gamma, eukaryotic translation elongation factor 1 gamma, [RH, Score=320, Expect=6e-106]} {Celegans: WBGene00008920, eef-1G, Probable elongation factor 1-gamma, [RH, Score=351, Expect=2e-118]} {Smed: dd_Smed_v6_308_0_1, dd_Smed_v6_308_0_1, [RH, Score=348, Expect=4e-117]} {RNA1509_308, RNA1509_34012, RNA1509_533, RNA1509_611} {SMEDTYPE: X1 [raj_facs_types]}

Mlig078418.g1 {REF} {Length: 950}
9. MligTC454_11434 Mlig021648.g2 9.29

 Int S/G2/M 

X1 RPL7A Mlig021648.g2 {REF} {Length: 971} {TRANSSPLICED} {Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.26, score=83.8]} {Human: ENSG00000148303, RPL7A, ribosomal protein L7a, [RH, Score=338, Expect=3e-117]; ENSG00000280858, RPL7A, ribosomal protein L7a, [RH, Score=338, Expect=3e-117]} {Mouse: ENSMUSG00000062647, Rpl7a, ribosomal protein L7A, [RH, Score=338, Expect=1e-117]} {Dmel: FBgn0014026, RpL7A, Ribosomal protein L7A, [RH, Score=301, Expect=6e-103]} {Celegans: WBGene00004419, rpl-7A, 60S ribosomal protein L7a, [RH, Score=305, Expect=1e-104]} {Smed: dd_Smed_v6_296_0_1, dd_Smed_v6_296_0_1, [RH, Score=299, Expect=2e-102]} {RNA1509_2102, RNA1509_274, RNA1509_30291, RNA1509_420} {SMEDTYPE: X1 [raj_facs_types]}
10. MligTC454_36915 Mlig008873.g3 9.26

 Int S/G2/M 

X1 NME2 Mlig008873.g3 {REF} {Length: 834} {TRANSSPLICED} {Pfam: Nucleoside diphosphate kinase [PF00334.19, score=178.8]} {Human: ENSG00000243678, NME2, NME/NM23 nucleoside diphosphate kinase 2, [RH, Score=230, Expect=2e-78]; ENSG00000011052, NME1-NME2, NME1-NME2 readthrough, [RH, Score=230, Expect=1e-76]; ENSG00000239672, NME1, NME/NM23 nucleoside diphosphate kinase 1, [RH, Score=224, Expect=6e-76]} {Mouse: ENSMUSG00000091228, Gm20390, predicted gene 20390, [RH, Score=229, Expect=2e-76]; ENSMUSG00000020857, Nme2, NME/NM23 nucleoside diphosphate kinase 2, [RH, Score=228, Expect=7e-78]; ENSMUSG00000037601, Nme1, NME/NM23 nucleoside diphosphate kinase 1, [RH, Score=226, Expect=5e-77]} {Dmel: FBgn0000150, awd, abnormal wing discs, [RH, Score=227, Expect=4e-77]} {Celegans: WBGene00009119, ndk-1, Nucleoside diphosphate kinase, [RH, Score=207, Expect=1e-69]} {Smed: dd_Smed_v6_856_0_1, dd_Smed_v6_856_0_1, [RH, Score=238, Expect=1e-81]} {RNA1509_14298, RNA1509_2821, RNA1509_480, RNA1509_542} {SMEDTYPE: X1 [raj_facs_types]}
11. MligTC454_41694 Mlig009946.g3 9.2

 Int S/G2/M 

 Germline 

 S/G2/M, no gonads 

Neoblast; X1; Sexual_biased PABPC4 Mlig009946.g3 {REF} {Length: 4043} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.22, score=282.3]; Poly-adenylate binding protein, unique domain [PF00658.18, score=106.6]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.6, score=41.7]; Nup53/35/40-type RNA recognition motif [PF14605.6, score=34.7]; RNA binding motif [PF08777.11, score=24.7]; Protein of unknown function (DUF4523) [PF15023.6, score=22.9]; RNA recognition motif [PF16367.5, score=21.8]; Occluded RNA-recognition motif [PF16842.5, score=19.6]} {Human: ENSG00000090621, PABPC4, poly(A) binding protein cytoplasmic 4, [RH, Score=736, Expect=0.0]; ENSG00000070756, PABPC1, poly(A) binding protein cytoplasmic 1, [RH, Score=715, Expect=0.0]} {Mouse: ENSMUSG00000011257, Pabpc4, poly(A) binding protein, cytoplasmic 4, [RH, Score=728, Expect=0.0]; ENSMUSG00000022283, Pabpc1, poly(A) binding protein, cytoplasmic 1, [RH, Score=715, Expect=0.0]} {Dmel: FBgn0265297, pAbp, poly(A) binding protein, [RH, Score=671, Expect=0.0]} {Celegans: WBGene00003902, pab-1, Polyadenylate-binding protein, [RH, Score=664, Expect=0.0]} {Smed: dd_Smed_v6_11729_0_1, dd_Smed_v6_11729_0_1, [RH, Score=724, Expect=0.0]} {RNA1509_10073, RNA1509_114, RNA1509_1179, RNA1509_1771, RNA1509_18204, RNA1509_18216, RNA1509_2105, RNA1509_24526, RNA1509_25464, RNA1509_29669, RNA1509_3171, RNA1509_6222, RNA1509_8584} {SMEDTYPE: Neoblast [dd_Smed_v6_11729_0_1, cytoplasmic poly(A) binding protein (PABPC)]} {SMEDTYPE: X1 [raj_facs_types]} {SMEDTYPE: Sexual_biased [CUFF.36071.0]}
12. MligTC454_29370 Mlig034889.g7 9.02

 Int S/G2/M 

X1 RPL10A Mlig034889.g7 {REF} {Length: 1017} {TRANSSPLICED} {Pfam: Ribosomal protein L1p/L10e family [PF00687.21, score=193.4]; MaoC like domain [PF01575.19, score=23.2]; Family of unknown function (DUF5403) [PF17395.2, score=22.4]} {Human: ENSG00000198755, RPL10A, ribosomal protein L10a, [Score=212, Expect=3e-68]} {Mouse: ENSMUSG00000037805, Rpl10a, ribosomal protein L10A, [Score=214, Expect=3e-69]} {Dmel: FBgn0036213, RpL10Ab, Ribosomal protein L10Ab, [RH, Score=211, Expect=3e-68]} {Celegans: WBGene00004412, rpl-1, 60S ribosomal protein L10a, [RH, Score=213, Expect=5e-69]} {Smed: dd_Smed_v6_350_0_1, dd_Smed_v6_350_0_1, [Score=223, Expect=2e-73]} {RNA1509_1297} {SMEDTYPE: X1 [raj_facs_types]}
13. MligTC454_26785 Mlig018910.g10 9.01

 Int S/G2/M 

 S/G2/M, no gonads 

 Neoblast 

X1; X2 NACA Mlig018910.g10 {REF} {Length: 1052} {TRANSSPLICED} {Pfam: NAC domain [PF01849.18, score=81.4]} {Human: ENSG00000196531, NACA, nascent polypeptide associated complex subunit alpha, [RH, Score=209, Expect=1e-61]} {Mouse: ENSMUSG00000061315, Naca, nascent polypeptide-associated complex alpha polypeptide, [RH, Score=209, Expect=7e-62]} {Dmel: FBgn0086904, Nacalpha, Nascent polypeptide associated complex protein alpha subunit, [RH, Score=195, Expect=7e-63]} {Celegans: WBGene00022042, icd-2, Nascent polypeptide-associated complex subunit alpha, [RH, Score=172, Expect=4e-54]} {Smed: dd_Smed_v6_371_0_1, dd_Smed_v6_371_0_1, [RH, Score=171, Expect=1e-53]} {RNA1509_206} {SMEDTYPE: X1; X2 [raj_facs_types]}
14. MligTC454_42769 Mlig000783.g3 9

 Int S/G2/M 

X1 RPS25 Mlig000783.g3 {REF} {Length: 534} {TRANSSPLICED} {Pfam: S25 ribosomal protein [PF03297.15, score=152.8]} {Human: ENSG00000280831, RPS25, ribosomal protein S25, [RH, Score=112, Expect=1e-32]; ENSG00000118181, RPS25, ribosomal protein S25, [RH, Score=112, Expect=1e-32]} {Mouse: ENSMUSG00000009927, Rps25, ribosomal protein S25, [RH, Score=128, Expect=1e-39]} {Dmel: FBgn0086472, RpS25, Ribosomal protein S25, [RH, Score=119, Expect=4e-36]} {Celegans: WBGene00004494, rps-25, 40S ribosomal protein S25, [RH, Score=113, Expect=8e-34]} {Smed: dd_Smed_v6_134_0_1, dd_Smed_v6_134_0_1, [RH, Score=105, Expect=2e-30]} {RNA1509_236, RNA1509_3156, RNA1509_49911, RNA1509_7130} {SMEDTYPE: X1 [raj_facs_types]}
15. MligTC454_38102 Mlig015479.g1 8.93

 Int S/G2/M 

X1 ATP5F1A Mlig015479.g1 {REF} {Length: 2711} {Pfam: ATP synthase alpha/beta family, nucleotide-binding domain [PF00006.25, score=249.1]; ATP synthase alpha/beta chain, C terminal domain [PF00306.27, score=157.7]; ATP synthase alpha/beta family, beta-barrel domain [PF02874.23, score=67.1]} {Human: ENSG00000152234, ATP5F1A, ATP synthase F1 subunit alpha, [RH, Score=879, Expect=0.0]} {Mouse: ENSMUSG00000116276, Atp5a1, ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, [RH, Score=881, Expect=0.0]; ENSMUSG00000025428, Atp5a1, ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, [RH, Score=881, Expect=0.0]} {Dmel: FBgn0011211, blw, bellwether, [RH, Score=876, Expect=0.0]} {Celegans: WBGene00010419, H28O16.1, ATP synthase subunit alpha, mitochondrial, [RH, Score=849, Expect=0.0]} {Smed: dd_Smed_v6_731_0_1, dd_Smed_v6_731_0_1, [RH, Score=903, Expect=0.0]} {RNA1509_102} {SMEDTYPE: X1 [raj_facs_types]}
16. MligTC454_56547 Mlig034228.g7 8.93

 Int S/G2/M 

RPL27 Mlig034228.g7 {REF} {Length: 573} {TRANSSPLICED} {Pfam: Ribosomal L27e protein family [PF01777.18, score=103.5]; KOW motif [PF00467.29, score=23.7]} {Human: ENSG00000131469, RPL27, ribosomal protein L27, [RH, Score=164, Expect=1e-52]} {Mouse: ENSMUSG00000063316, Rpl27, ribosomal protein L27, [RH, Score=164, Expect=9e-53]} {Dmel: FBgn0039359, RpL27, Ribosomal protein L27, [RH, Score=114, Expect=3e-33]} {Celegans: WBGene00004441, rpl-27, 60S ribosomal protein L27, [RH, Score=162, Expect=3e-52]} {Smed: dd_Smed_v6_200_0_1, dd_Smed_v6_200_0_1, [RH, Score=143, Expect=7e-45]} {RNA1509_3058, RNA1509_350, RNA1509_591, RNA1509_701}
17. MligTC454_37336 Mlig031765.g4 8.91

 Int S/G2/M 

X1 RPL30 Mlig031765.g4 {REF} {Length: 569} {TRANSSPLICED} {Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.26, score=81.3]} {Human: ENSG00000156482, RPL30, ribosomal protein L30, [RH, Score=169, Expect=2e-55]} {Mouse: ENSMUSG00000058600, Rpl30, ribosomal protein L30, [RH, Score=168, Expect=2e-55]} {Dmel: FBgn0086710, RpL30, Ribosomal protein L30, [RH, Score=162, Expect=2e-53]} {Celegans: WBGene00004444, rpl-30, Ribosomal Protein, Large subunit, [Score=153, Expect=1e-49]} {Smed: dd_Smed_v6_111_0_1, dd_Smed_v6_111_0_1, [RH, Score=126, Expect=6e-39]} {RNA1509_3774, RNA1509_5084, RNA1509_578, RNA1509_7389} {SMEDTYPE: X1 [raj_facs_types]}
18. MligTC454_49536 Mlig001661.g42, Mlig001661.g13 8.89

 Int S/G2/M 

UBC

Mlig001661.g42 {REF} {Length: 1509} {Pfam: Ubiquitin family [PF00240.23, score=450.9]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.8, score=218.3]; Ubiquitin-like domain [PF14560.6, score=88.7]; TANK binding kinase 1 ubiquitin-like domain [PF18396.1, score=61.0]; Ubiquitin-2 like Rad60 SUMO-like [PF13881.6, score=56.8]; Ubiquitin-like domain [PF18037.1, score=55.7]; DUF2407 ubiquitin-like domain [PF10302.9, score=45.8]; Silencing defective 2 N-terminal ubiquitin domain [PF13019.6, score=32.1]; Ubiquitin-like domain [PF18036.1, score=27.0]; Protein of unknown function (DUF2870) [PF11069.8, score=26.3]; RNA methyltransferase [PF04452.14, score=25.3]; Toluene-4-monooxygenase system protein B (TmoB) [PF06234.12, score=25.3]; UDP-glucose:Glycoprotein Glucosyltransferase [PF06427.11, score=25.0]; PI3-kinase family, ras-binding domain [PF00794.18, score=24.9]; Bacterial Ig domain [PF17957.1, score=21.2]; Protein of unknown function (DUF969) [PF06149.12, score=19.8]; GDYXXLXY protein [PF14345.6, score=19.8]; Raf-like Ras-binding domain [PF02196.15, score=19.4]; FlgD Ig-like domain [PF13860.6, score=19.4]; Domain of Unknown Function with PDB structure (DUF3861) [PF12977.7, score=19.3]; CorA-like Mg2+ transporter protein [PF01544.18, score=18.6]} {Human: ENSG00000150991, UBC, ubiquitin C, [RH, Score=595, Expect=0.0]} {Mouse: ENSMUSG00000019505, Ubb, ubiquitin B, [RH, Score=596, Expect=0.0]} {Dmel: FBgn0003943, Ubi-p63E, Ubiquitin-63E, [Score=595, Expect=0.0]} {Celegans: WBGene00006727, ubq-1, Polyubiquitin-A Ubiquitin Ubiquitin-related, [Score=587, Expect=0.0]} {Smed: dd_Smed_v6_1697_0_2, dd_Smed_v6_1697_0_2, [RH, Score=164, Expect=2e-51]} {RNA1509_199}

Mlig001661.g13 {REF} {Length: 1521} {Pfam: Ubiquitin family [PF00240.23, score=559.5]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.8, score=268.8]; Ubiquitin-like domain [PF14560.6, score=106.6]; TANK binding kinase 1 ubiquitin-like domain [PF18396.1, score=72.7]; Ubiquitin-2 like Rad60 SUMO-like [PF13881.6, score=68.1]; Ubiquitin-like domain [PF18037.1, score=65.1]; DUF2407 ubiquitin-like domain [PF10302.9, score=54.8]; Silencing defective 2 N-terminal ubiquitin domain [PF13019.6, score=37.9]; Protein of unknown function (DUF2870) [PF11069.8, score=31.1]; Toluene-4-monooxygenase system protein B (TmoB) [PF06234.12, score=29.8]; UDP-glucose:Glycoprotein Glucosyltransferase [PF06427.11, score=28.5]; Ubiquitin-like domain [PF18036.1, score=28.4]; Bacterial Ig domain [PF17957.1, score=24.8]; Protein of unknown function (DUF969) [PF06149.12, score=23.7]; GDYXXLXY protein [PF14345.6, score=23.3]; Raf-like Ras-binding domain [PF02196.15, score=22.5]; CorA-like Mg2+ transporter protein [PF01544.18, score=21.3]; Domain of Unknown Function with PDB structure (DUF3861) [PF12977.7, score=20.9]; FlgD Ig-like domain [PF13860.6, score=20.6]; ORF11CD3 domain [PF10549.9, score=19.5]} {Human: ENSG00000150991, UBC, ubiquitin C, [Score=743, Expect=0.0]} {Mouse: ENSMUSG00000008348, Ubc, ubiquitin C, [Score=744, Expect=0.0]} {Dmel: FBgn0003943, Ubi-p63E, Ubiquitin-63E, [Score=743, Expect=0.0]} {Celegans: WBGene00006727, ubq-1, Polyubiquitin-A Ubiquitin Ubiquitin-related, [Score=733, Expect=0.0]} {Smed: dd_Smed_v6_1697_0_2, dd_Smed_v6_1697_0_2, [RH, Score=164, Expect=1e-50]} {RNA1509_199}
19. MligTC454_57158 Mlig010121.g2 8.88

 Int S/G2/M 

Testis; Sexual_biased YBX3 Mlig010121.g2 {REF} {Length: 2218} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.22, score=89.3]; Ribonuclease B OB domain [PF08206.11, score=19.2]} {Human: ENSG00000060138, YBX3, Y-box binding protein 3, [Score=151, Expect=2e-43]; ENSG00000065978, YBX1, Y-box binding protein 1, [Score=149, Expect=2e-42]; ENSG00000006047, YBX2, Y-box binding protein 2, [Score=144, Expect=6e-40]} {Mouse: ENSMUSG00000030189, Ybx3, Y box protein 3, [Score=154, Expect=9e-45]; ENSMUSG00000028639, Ybx1, Y box protein 1, [Score=149, Expect=2e-42]} {Dmel: FBgn0022959, yps, ypsilon schachtel, [Score=140, Expect=4e-39]} {Celegans: WBGene00000472, cey-1, C. Elegans Y-box, [Score=148, Expect=7e-44]} {Smed: dd_Smed_v6_25570_0_1, dd_Smed_v6_25570_0_1, [Score=161, Expect=5e-47]} {RNA1509_29342, RNA1509_4915, RNA1509_551, RNA1509_58199, RNA1509_9040, RNA1509_9363} {SMEDTYPE: Testis [Contig5455_SE3]} {SMEDTYPE: Sexual_biased [CUFF.517806.0]}
20. MligTC454_47891 Mlig033621.g80 8.86

 Int S/G2/M 

X1; Asexual_biased CNBP Mlig033621.g80 {REF} {Length: 897} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.23, score=116.2]; Zinc knuckle [PF13917.6, score=35.1]; Zinc knuckle [PF13696.6, score=32.0]; GAG-polyprotein viral zinc-finger [PF14787.6, score=30.1]; Zinc knuckle [PF14392.6, score=24.3]} {Human: ENSG00000169714, CNBP, CCHC-type zinc finger nucleic acid binding protein, [Score=77.8, Expect=3e-18]} {Mouse: ENSMUSG00000030057, Cnbp, cellular nucleic acid binding protein, [Score=76.6, Expect=6e-18]} {Dmel: FBgn0034802, CNBP, CCHC-type zinc finger nucleic acid binding protein, [Score=69.3, Expect=2e-15]} {Celegans: WBGene00019537, K08D12.3, [Score=67.8, Expect=5e-15]} {Smed: dd_Smed_v6_62_0_1, dd_Smed_v6_62_0_1, [Score=85.9, Expect=7e-22]} {RNA1509_11283, RNA1509_1491, RNA1509_22942, RNA1509_342, RNA1509_34521, RNA1509_39433, RNA1509_56569} {SMEDTYPE: X1 [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.44344.0]}
First Previous 1 2 3 Next Last
Berezikov Lab - 2016-2021 © ERIBA