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Found 437 results for log2(Irr72h/Irr24h) <= -1 and fdr <= 0.05. Showing entries 1-20.

Graph Cluster Transcripts Mean logCPM Classification Smed/Human type Human gene Annotation
1. MligTC454_43220 Mlig010077.g8 9.02 Mlig010077.g8 {REF} {Length: 534} {NoTransDecoderORF} {RNA1509_14626, RNA1509_1587}
2. MligTC454_43824 Mlig074903.g1 7.2 DYNLL1 Mlig074903.g1 {REF} {Length: 861} {Pfam: Dynein light chain type 1 [PF01221.18, score=80.5]} {Human: ENSG00000088986, DYNLL1, dynein light chain LC8-type 1, [Score=79.0, Expect=2e-19]; ENSG00000264364, DYNLL2, dynein light chain LC8-type 2, [Score=75.9, Expect=3e-18]} {Mouse: ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [Score=79.0, Expect=2e-19]; ENSMUSG00000020483, Dynll2, dynein light chain LC8-type 2, [Score=75.9, Expect=2e-18]} {Dmel: FBgn0011760, ctp, cut up, [Score=77.4, Expect=4e-19]} {Celegans: WBGene00001005, dlc-1, Dynein light chain 1, cytoplasmic, [Score=75.9, Expect=1e-18]} {Smed: dd_Smed_v6_10084_0_5, dd_Smed_v6_10084_0_5, [Score=77.4, Expect=2e-19]} {RNA1509_6984}
3. MligTC454_46855 Mlig001412.g3 6.51 Mlig001412.g3 {REF} {Length: 1515} {NoTransDecoderORF} {RNA1509_3}
4. MligTC454_38269 Mlig000187.g9 6.35 X2 COL6A6 Mlig000187.g9 {REF} {Length: 12027} {Pfam: von Willebrand factor type A domain [PF00092.28, score=218.4]; von Willebrand factor type A domain [PF13519.6, score=112.0]; Transcription factor TFIID (or TATA-binding protein, TBP) [PF00352.21, score=42.4]} {Human: ENSG00000206384, COL6A6, collagen type VI alpha 6 chain, [Score=90.1, Expect=7e-17]; ENSG00000111799, COL12A1, collagen type XII alpha 1 chain, [Score=86.3, Expect=1e-15]} {Mouse: ENSMUSG00000032332, Col12a1, collagen, type XII, alpha 1, [Score=85.9, Expect=1e-15]; ENSMUSG00000025650, Col7a1, collagen, type VII, alpha 1, [Score=84.3, Expect=3e-15]; ENSMUSG00000022371, Col14a1, collagen, type XIV, alpha 1, [Score=83.2, Expect=6e-15]} {Celegans: WBGene00019570, K09E2.1, [RH, Score=64.7, Expect=1e-09]} {Smed: dd_Smed_v6_1071_0_1, dd_Smed_v6_1071_0_1, [Score=126, Expect=9e-29]} {RNA1509_167, RNA1509_204, RNA1509_32716, RNA1509_35430} {SMEDTYPE: X2 [raj_facs_types]}
5. MligTC454_46273 Mlig026604.g2 6.15 Mlig026604.g2 {REF} {Length: 692} {RNA1509_34450}
6. MligTC454_29392 Mlig046107.g3 5.71 Mlig046107.g3 {REF} {Length: 2349} {RNA1509_1096, RNA1509_1313, RNA1509_370}
7. MligTC454_34388 Mlig030334.g10 5.41 Mlig030334.g10 {REF} {Length: 1282} {RNA1509_14264}
8. MligTC454_59011 Mlig023279.g10 5.38

 Int S/G2/M 

 Germline 

Testis; Sexual_biased CKB Mlig023279.g10 {REF} {Length: 1480} {TRANSSPLICED} {Pfam: ATP:guanido phosphotransferase, C-terminal catalytic domain [PF00217.19, score=273.2]; ATP:guanido phosphotransferase, N-terminal domain [PF02807.15, score=95.1]} {Human: ENSG00000166165, CKB, creatine kinase B, [RH, Score=297, Expect=3e-98]; ENSG00000104879, CKM, creatine kinase, M-type, [RH, Score=285, Expect=4e-93]} {Mouse: ENSMUSG00000001270, Ckb, creatine kinase, brain, [RH, Score=294, Expect=3e-97]; ENSMUSG00000030399, Ckm, creatine kinase, muscle, [RH, Score=294, Expect=6e-97]} {Dmel: FBgn0000116, Argk, Arginine kinase, [RH, Score=539, Expect=0.0]} {Celegans: WBGene00013894, ZC434.8, Probable arginine kinase ZC434.8, [RH, Score=440, Expect=5e-155]} {Smed: dd_Smed_v6_67158_0_1, dd_Smed_v6_67158_0_1, [RH, Score=258, Expect=8e-85]} {RNA1509_287, RNA1509_737} {SMEDTYPE: Testis [Contig5990_SE3]} {SMEDTYPE: Sexual_biased [CUFF.514182.0]}
9. MligTC454_34384 Mlig030473.g3 5.36

 Irradiation 

Gut; Testis TUBA1C Mlig030473.g3 {REF} {Length: 1875} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.25, score=221.7]; Tubulin C-terminal domain [PF03953.17, score=170.2]} {Human: ENSG00000167553, TUBA1C, tubulin alpha 1c, [Score=734, Expect=0.0]; ENSG00000123416, TUBA1B, tubulin alpha 1b, [Score=732, Expect=0.0]; ENSG00000167552, TUBA1A, tubulin alpha 1a, [Score=729, Expect=0.0]; ENSG00000075886, TUBA3D, tubulin alpha 3d, [Score=729, Expect=0.0]; ENSG00000198033, TUBA3C, tubulin alpha 3c, [Score=729, Expect=0.0]; ENSG00000127824, TUBA4A, tubulin alpha 4a, [Score=723, Expect=0.0]; ENSG00000152086, TUBA3E, tubulin alpha 3e, [Score=719, Expect=0.0]; ENSG00000183785, TUBA8, tubulin alpha 8, [Score=711, Expect=0.0]} {Mouse: ENSMUSG00000043091, Tuba1c, tubulin, alpha 1C, [Score=734, Expect=0.0]; ENSMUSG00000023004, Tuba1b, tubulin, alpha 1B, [Score=732, Expect=0.0]; ENSMUSG00000067702, Tuba3a, tubulin, alpha 3A, [Score=729, Expect=0.0]; ENSMUSG00000072235, Tuba1a, tubulin, alpha 1A, [Score=729, Expect=0.0]; ENSMUSG00000067338, Tuba3b, tubulin, alpha 3B, [Score=729, Expect=0.0]; ENSMUSG00000026202, Tuba4a, tubulin, alpha 4A, [Score=723, Expect=0.0]; ENSMUSG00000030137, Tuba8, tubulin, alpha 8, [Score=709, Expect=0.0]} {Dmel: FBgn0003885, alphaTub84D, alpha-Tubulin at 84D, [Score=721, Expect=0.0]} {Celegans: WBGene00006529, tba-2, Tubulin alpha-2 chain, [Score=726, Expect=0.0]} {Smed: dd_Smed_v6_10947_0_1, dd_Smed_v6_10947_0_1, [Score=709, Expect=0.0]} {RNA1509_107} {SMEDTYPE: Gut [dd_Smed_v6_10947_0_1, tubulin, alpha 3d (TUBA3D)]} {SMEDTYPE: Testis [Contig7537_SE3]}
10. MligTC454_46850 Mlig024510.g19 5.35 Mlig024510.g19 {REF} {Length: 426} {NoTransDecoderORF} {RNA1509_1780}
11. MligTC454_47048 Mlig036736.g1, Mlig024346.g2 5.11

Mlig036736.g1 {REF} {Length: 1535} {RNA1509_10342}

Mlig024346.g2 {REF} {Length: 2030} {NoTransDecoderORF} {RNA1509_22037, RNA1509_36619}
12. MligTC454_46068 Mlig033687.g2 5.09 X1 EIF1AY Mlig033687.g2 {REF} {Length: 997} {TRANSSPLICED} {Pfam: Translation initiation factor 1A / IF-1 [PF01176.19, score=81.3]} {Human: ENSG00000198692, EIF1AY, eukaryotic translation initiation factor 1A Y-linked, [RH, Score=204, Expect=2e-68]; ENSG00000173674, EIF1AX, eukaryotic translation initiation factor 1A X-linked, [RH, Score=204, Expect=2e-68]} {Mouse: ENSMUSG00000067194, Eif1ax, eukaryotic translation initiation factor 1A, X-linked, [RH, Score=204, Expect=1e-68]; ENSMUSG00000057561, Eif1a, eukaryotic translation initiation factor 1A, [RH, Score=203, Expect=7e-68]; ENSMUSG00000113805, Gm5788, predicted pseudogene 5788, [RH, Score=202, Expect=1e-67]; ENSMUSG00000113201, Gm21936, predicted gene, 21936, [RH, Score=202, Expect=1e-67]; ENSMUSG00000093847, Gm5039, predicted gene 5039, [RH, Score=202, Expect=2e-67]; ENSMUSG00000072905, Gm2016, predicted gene 2016, [RH, Score=201, Expect=4e-67]; ENSMUSG00000079034, Gm8300, predicted gene 8300, [RH, Score=200, Expect=9e-67]; ENSMUSG00000095799, Gm8332, predicted pseudogene 8332, [RH, Score=200, Expect=9e-67]; ENSMUSG00000079029, Gm5662, predicted gene 5662, [RH, Score=200, Expect=7e-67]; ENSMUSG00000095717, Gm2056, predicted gene 2056, [RH, Score=199, Expect=3e-66]; ENSMUSG00000096049, Gm2075, predicted gene 2075, [RH, Score=196, Expect=5e-65]; ENSMUSG00000096803, Gm6803, predicted gene 6803, [RH, Score=196, Expect=5e-65]; ENSMUSG00000096619, Gm2035, predicted pseudogene 2035, [RH, Score=195, Expect=1e-64]; ENSMUSG00000113971, Gm2022, predicted pseudogene 2022, [RH, Score=194, Expect=2e-64]} {Dmel: FBgn0026250, eIF1A, eukaryotic translation initiation factor 1A, [RH, Score=217, Expect=2e-73]} {Celegans: WBGene00019162, eif-1.A, Eukaryotic Initiation Factor, [RH, Score=189, Expect=7e-62]} {Smed: dd_Smed_v6_334_0_1, dd_Smed_v6_334_0_1, [RH, Score=225, Expect=2e-76]} {RNA1509_23718} {SMEDTYPE: X1 [raj_facs_types]}
13. MligTC454_55436 Mlig010863.g4 5.03 X1 RPS27L Mlig010863.g4 {REF} {Length: 440} {TRANSSPLICED} {Pfam: Ribosomal protein S27 [PF01667.17, score=95.0]} {Human: ENSG00000185088, RPS27L, ribosomal protein S27 like, [RH, Score=135, Expect=6e-43]; ENSG00000177954, RPS27, ribosomal protein S27, [RH, Score=130, Expect=4e-41]} {Mouse: ENSMUSG00000036781, Rps27l, ribosomal protein S27-like, [RH, Score=135, Expect=4e-43]; ENSMUSG00000050621, Rps27rt, ribosomal protein S27, retrogene, [RH, Score=130, Expect=3e-41]; ENSMUSG00000090733, Rps27, ribosomal protein S27, [RH, Score=130, Expect=3e-41]} {Dmel: FBgn0039300, RpS27, Ribosomal protein S27, [RH, Score=142, Expect=9e-46]} {Celegans: WBGene00004496, rps-27, 40S ribosomal protein S27, [RH, Score=127, Expect=6e-40]} {Smed: dd_Smed_v6_106_0_1, dd_Smed_v6_106_0_1, [RH, Score=127, Expect=3e-40]} {RNA1509_53664} {SMEDTYPE: X1 [raj_facs_types]}
14. MligTC454_42938 Mlig035959.g6, Mlig022283.g1 4.98 Xins TRIM71

Mlig035959.g6 {REF} {Length: 2297} {Pfam: NHL repeat [PF01436.21, score=53.1]} {Human: ENSG00000206557, TRIM71, tripartite motif containing 71, [Score=89.0, Expect=5e-18]} {Mouse: ENSMUSG00000079259, Trim71, tripartite motif-containing 71, [Score=89.0, Expect=3e-18]} {Dmel: FBgn0265356, tn, thin, [Score=88.2, Expect=4e-18]} {Celegans: WBGene00003597, nhl-1, RING finger protein nhl-1, [Score=78.6, Expect=3e-15]} {Smed: dd_Smed_v6_26017_0_1, dd_Smed_v6_26017_0_1, [RH, Score=124, Expect=2e-31]} {SMEDTYPE: Xins [raj_facs_types]}

Mlig022283.g1 {REF} {Length: 933} {RNA1509_22026}
15. MligTC454_74214 Mlig065506.g1 4.97

 Irradiation 

Parapharyngeal; Xins; Asexual_biased GLIPR1L1 Mlig065506.g1 {REF} {Length: 525} {Pfam: Cysteine-rich secretory protein family [PF00188.26, score=52.6]} {Human: ENSG00000173401, GLIPR1L1, GLIPR1 like 1, [Score=88.6, Expect=2e-22]} {Mouse: ENSMUSG00000020213, Glipr1l1, GLI pathogenesis-related 1 like 1, [Score=86.3, Expect=1e-21]; ENSMUSG00000112611, Glipr1l3, GLI pathogenesis-related 1 like 3, [Score=82.4, Expect=4e-20]} {Dmel: FBgn0038126, CG8483, [Score=67.0, Expect=4e-14]} {Celegans: WBGene00009895, scl-2, SCP-Like extracellular protein, [Score=54.7, Expect=3e-10]} {Smed: dd_Smed_v6_433_0_1, dd_Smed_v6_433_0_1, [Score=104, Expect=2e-29]} {RNA1509_2231, RNA1509_234, RNA1509_46275, RNA1509_46434} {SMEDTYPE: Parapharyngeal [dd_Smed_v6_433_0_1, peptidase inhibitor 16 (PI16)]} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.495650.0]}
16. MligTC454_57152 Mlig001513.g1 4.95

 Int S/G2/M 

X1 H3F3A Mlig001513.g1 {REF} {Length: 1573} {TRANSSPLICED} {Pfam: Core histone H2A/H2B/H3/H4 [PF00125.24, score=179.6]; Centromere kinetochore component CENP-T histone fold [PF15511.6, score=21.3]; PCNA-associated factor histone like domain [PF15715.5, score=21.0]; CENP-S protein [PF15630.6, score=19.9]} {Human: ENSG00000163041, H3F3A, H3 histone family member 3A, [RH, Score=278, Expect=9e-97]; ENSG00000132475, H3F3B, H3 histone family member 3B, [RH, Score=278, Expect=9e-97]; ENSG00000203811, HIST2H3C, histone cluster 2 H3 family member c, [RH, Score=273, Expect=8e-95]; ENSG00000183598, HIST2H3D, histone cluster 2 H3 family member d, [RH, Score=273, Expect=8e-95]; ENSG00000203852, HIST2H3A, histone cluster 2 H3 family member a, [RH, Score=273, Expect=8e-95]; ENSG00000197153, HIST1H3J, histone cluster 1 H3 family member j, [RH, Score=271, Expect=4e-94]; ENSG00000274750, HIST1H3E, histone cluster 1 H3 family member e, [RH, Score=271, Expect=4e-94]; ENSG00000277775, HIST1H3F, histone cluster 1 H3 family member f, [RH, Score=271, Expect=4e-94]; ENSG00000275379, HIST1H3I, histone cluster 1 H3 family member i, [RH, Score=271, Expect=4e-94]; ENSG00000273983, HIST1H3G, histone cluster 1 H3 family member g, [RH, Score=271, Expect=4e-94]; ENSG00000278828, HIST1H3H, histone cluster 1 H3 family member h, [RH, Score=271, Expect=4e-94]; ENSG00000197409, HIST1H3D, histone cluster 1 H3 family member d, [RH, Score=271, Expect=4e-94]; ENSG00000274267, HIST1H3B, histone cluster 1 H3 family member b, [RH, Score=271, Expect=4e-94]; ENSG00000275714, HIST1H3A, histone cluster 1 H3 family member a, [RH, Score=271, Expect=4e-94]; ENSG00000278272, HIST1H3C, histone cluster 1 H3 family member c, [RH, Score=271, Expect=4e-94]; ENSG00000285435, HIST3H3, histone cluster 3 H3, [RH, Score=266, Expect=2e-92]; ENSG00000168148, HIST3H3, histone cluster 3 H3, [RH, Score=266, Expect=2e-92]; ENSG00000203818, HIST2H3PS2, histone cluster 2 H3 pseudogene 2, [RH, Score=265, Expect=7e-92]} {Mouse: ENSMUSG00000060743, H3f3a, H3 histone, family 3A, [RH, Score=278, Expect=6e-97]; ENSMUSG00000016559, H3f3b, H3 histone, family 3B, [RH, Score=278, Expect=6e-97]; ENSMUSG00000093769, Hist2h3c1, histone cluster 2, H3c1, [RH, Score=273, Expect=5e-95]; ENSMUSG00000074403, Hist2h3b, histone cluster 2, H3b, [RH, Score=273, Expect=5e-95]; ENSMUSG00000081058, Hist2h3c2, histone cluster 2, H3c2, [RH, Score=273, Expect=5e-95]; ENSMUSG00000099583, Hist1h3d, histone cluster 1, H3d, [RH, Score=273, Expect=5e-95]; ENSMUSG00000069273, Hist1h3e, histone cluster 1, H3e, [RH, Score=273, Expect=5e-95]; ENSMUSG00000069267, Hist1h3b, histone cluster 1, H3b, [RH, Score=273, Expect=5e-95]; ENSMUSG00000100210, Hist1h3f, histone cluster 1, H3f, [RH, Score=273, Expect=5e-95]; ENSMUSG00000069310, Hist1h3c, histone cluster 1, H3c, [RH, Score=273, Expect=5e-95]; ENSMUSG00000099517, Hist1h3g, histone cluster 1, H3g, [RH, Score=271, Expect=3e-94]; ENSMUSG00000101355, Hist1h3h, histone cluster 1, H3h, [RH, Score=271, Expect=3e-94]; ENSMUSG00000069265, Hist1h3a, histone cluster 1, H3a, [RH, Score=271, Expect=3e-94]; ENSMUSG00000101972, Hist1h3i, histone cluster 1, H3i, [RH, Score=271, Expect=3e-94]} {Dmel: FBgn0004828, His3.3B, Histone H3.3B, [RH, Score=278, Expect=4e-97]} {Celegans: WBGene00001945, his-71, Histone H3.3 type 1, [RH, Score=276, Expect=1e-96]} {Smed: dd_Smed_v6_532_0_1, dd_Smed_v6_532_0_1, [RH, Score=278, Expect=1e-97]} {RNA1509_20511, RNA1509_59293} {SMEDTYPE: X1 [raj_facs_types]}
17. MligTC454_63295 Mlig007744.g1 4.93 X1 FAU Mlig007744.g1 {REF} {Length: 948} {TRANSSPLICED} {Pfam: Ribosomal protein S30 [PF04758.14, score=43.6]} {Human: ENSG00000149806, FAU, FAU, ubiquitin like and ribosomal protein S30 fusion, [Score=44.3, Expect=5e-06]} {Mouse: ENSMUSG00000038274, Fau, Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived), [Score=43.5, Expect=1e-05]} {Dmel: FBgn0038834, RpS30, Ribosomal protein S30, [Score=45.1, Expect=2e-06]} {Smed: dd_Smed_v6_126_0_1, dd_Smed_v6_126_0_1, [Score=48.9, Expect=9e-08]} {RNA1509_10703, RNA1509_46979} {SMEDTYPE: X1 [raj_facs_types]}
18. MligTC454_45444 Mlig025766.g6 4.92 Mlig025766.g6 {REF} {Length: 1237} {RNA1509_7730}
19. MligTC454_75969 Mlig017703.g1, Mlig017703.g2, Mlig017703.g3 4.9

 Int S/G2/M 

 Germline 

Mlig017703.g1 {REF} {Length: 1499} {RNA1509_13639, RNA1509_15701, RNA1509_2626, RNA1509_3873, RNA1509_47939, RNA1509_7106}

Mlig017703.g2 {REF} {Length: 1494} {RNA1509_1436, RNA1509_2626}

Mlig017703.g3 {REF} {Length: 1585} {RNA1509_2626}
20. MligTC454_51485 Mlig102905.g1 4.74 X1; Sexual_biased RPS5 Mlig102905.g1 {REF} {Length: 774} {TRANSSPLICED} {Pfam: Ribosomal protein S7p/S5e [PF00177.21, score=119.9]} {Human: ENSG00000083845, RPS5, ribosomal protein S5, [RH, Score=345, Expect=3e-122]} {Mouse: ENSMUSG00000012848, Rps5, ribosomal protein S5, [RH, Score=345, Expect=2e-122]} {Dmel: FBgn0002590, RpS5a, Ribosomal protein S5a, [RH, Score=347, Expect=3e-123]} {Celegans: WBGene00004474, rps-5, 40S ribosomal protein S5, [RH, Score=340, Expect=2e-120]} {Smed: dd_Smed_v6_295_0_1, dd_Smed_v6_295_0_1, [RH, Score=299, Expect=9e-105]} {RNA1509_5604} {SMEDTYPE: X1 [raj_facs_types]} {SMEDTYPE: Sexual_biased [CUFF.423976.0]}
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