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Found 63 results for log2(Irr72h/Irr24h) >= 1 and fdr <= 0.05. Showing entries 1-20.

Graph Cluster Transcripts Mean logCPM Classification Smed/Human type Human gene Annotation
1. MligTC454_20137 Mlig015919.g1 3.63 Mlig015919.g1 {REF} {Length: 1577} {RNA1509_51415, RNA1509_6162}
2. MligTC454_48664 Mlig057471.g48 3.3 Mlig057471.g48 {REF} {Length: 2572} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_731}
3. MligTC454_57448 Mlig122886.g2 3.27 X2 AP3M1 Mlig122886.g2 {REF} {Length: 1794} {TRANSSPLICED} {Pfam: Adaptor complexes medium subunit family [PF00928.21, score=215.1]; Clathrin adaptor complex small chain [PF01217.20, score=39.3]} {Human: ENSG00000185009, AP3M1, adaptor related protein complex 3 subunit mu 1, [RH, Score=543, Expect=0.0]; ENSG00000070718, AP3M2, adaptor related protein complex 3 subunit mu 2, [RH, Score=516, Expect=0.0]} {Mouse: ENSMUSG00000021824, Ap3m1, adaptor-related protein complex 3, mu 1 subunit, [RH, Score=540, Expect=0.0]; ENSMUSG00000031539, Ap3m2, adaptor-related protein complex 3, mu 2 subunit, [RH, Score=515, Expect=0.0]} {Dmel: FBgn0000330, cm, carmine, [RH, Score=509, Expect=3e-180]} {Celegans: WBGene00000164, apm-3, AdaPtin, Mu/medium chain (Clathrin associated complex), [RH, Score=460, Expect=3e-161]} {Smed: dd_Smed_v6_6368_0_1, dd_Smed_v6_6368_0_1, [RH, Score=474, Expect=1e-166]} {RNA1509_9522} {SMEDTYPE: X2 [raj_facs_types]}
4. MligTC454_21154 Mlig029257.g2 2.73

 Irradiation 

Mlig029257.g2 {REF} {Length: 3362} {RNA1509_12608, RNA1509_34589, RNA1509_59322}
5. MligTC454_55425 Mlig031755.g26 2.7 Gut; Xins; Sexual_biased CTSA Mlig031755.g26 {REF} {Length: 3350} {Pfam: Serine carboxypeptidase [PF00450.22, score=406.8]} {Human: ENSG00000064601, CTSA, cathepsin A, [RH, Score=417, Expect=1e-141]} {Mouse: ENSMUSG00000017760, Ctsa, cathepsin A, [RH, Score=425, Expect=1e-144]} {Dmel: FBgn0038738, CG4572, [Score=108, Expect=4e-25]} {Celegans: WBGene00019605, ctsa-1, Uncharacterized serine carboxypeptidase ctsa-1, [RH, Score=339, Expect=1e-111]} {Smed: dd_Smed_v6_785_0_1, dd_Smed_v6_785_0_1, [RH, Score=392, Expect=5e-132]} {RNA1509_11067, RNA1509_2939, RNA1509_366, RNA1509_5001, RNA1509_56324, RNA1509_6114} {SMEDTYPE: Gut [dd_Smed_v6_785_0_1, cathepsin A (CTSA)]} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Sexual_biased [CUFF.626805.0]}
6. MligTC454_47188 Mlig020384.g7, Mlig012885.g1 2.69

Mlig020384.g7 {REF} {Length: 1134} {RNA1509_34101}

Mlig012885.g1 {REF} {Length: 745} {TRANSSPLICED} {RNA1509_11222}
7. MligTC454_44776 Mlig117168.g3 2.59 Mlig117168.g3 {REF} {Length: 2707} {Pfam: Protein of unknown function (DUF1258) [PF06869.12, score=58.8]; Domain of unknown function (DUF4218) [PF13960.6, score=23.5]; Transposase family tnp2 [PF02992.14, score=18.8]} {Celegans: WBGene00012077, T27A8.5, [RH, Score=63.9, Expect=2e-10]} {RNA1509_1582}
8. MligTC454_74046 Mlig064932.g2 2.47 Sexual_biased; repression P2RX4 Mlig064932.g2 {REF} {Length: 2550} {tRNA: Val(CAC),pseudo, score=22.2} {Pfam: ATP P2X receptor [PF00864.19, score=457.6]} {Human: ENSG00000135124, P2RX4, purinergic receptor P2X 4, [Score=355, Expect=2e-120]} {Mouse: ENSMUSG00000029470, P2rx4, purinergic receptor P2X, ligand-gated ion channel 4, [Score=338, Expect=7e-114]} {Smed: dd_Smed_v6_7838_0_1, dd_Smed_v6_7838_0_1, [Score=364, Expect=2e-124]} {RNA1509_7647} {SMEDTYPE: Sexual_biased [CUFF.66594.0]} {SMEDTYPE: repression [32]}
9. MligTC454_75596 Mlig025069.g14, Mlig025069.g5 2.32 Xins; Asexual_biased ZNF362

Mlig025069.g14 {REF} {Length: 1744} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.6, score=77.5]; Zinc finger, C2H2 type [PF00096.26, score=64.6]; C2H2-type zinc finger [PF13894.6, score=45.8]; Zinc-finger of C2H2 type [PF12874.7, score=26.3]; zinc-finger C2H2-type [PF16622.5, score=25.2]} {Human: ENSG00000160094, ZNF362, zinc finger protein 362, [Score=171, Expect=2e-49]; ENSG00000126746, ZNF384, zinc finger protein 384, [Score=168, Expect=1e-47]} {Mouse: ENSMUSG00000028799, Zfp362, zinc finger protein 362, [Score=171, Expect=1e-49]; ENSMUSG00000038346, Zfp384, zinc finger protein 384, [Score=169, Expect=3e-48]} {Dmel: FBgn0010768, sqz, squeeze, [RH, Score=179, Expect=7e-52]} {Celegans: WBGene00003015, lin-29, Transcription factor, [RH, Score=167, Expect=6e-48]} {Smed: dd_Smed_v6_18940_0_1, dd_Smed_v6_18940_0_1, [Score=254, Expect=2e-79]} {RNA1509_17051} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.628791.0]}

Mlig025069.g5 {REF} {Length: 1740} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.6, score=77.5]; Zinc finger, C2H2 type [PF00096.26, score=64.5]; C2H2-type zinc finger [PF13894.6, score=45.8]; Zinc-finger of C2H2 type [PF12874.7, score=26.3]; zinc-finger C2H2-type [PF16622.5, score=25.1]} {Human: ENSG00000160094, ZNF362, zinc finger protein 362, [Score=171, Expect=2e-49]; ENSG00000126746, ZNF384, zinc finger protein 384, [Score=168, Expect=1e-47]} {Mouse: ENSMUSG00000028799, Zfp362, zinc finger protein 362, [Score=171, Expect=1e-49]; ENSMUSG00000038346, Zfp384, zinc finger protein 384, [Score=169, Expect=4e-48]} {Dmel: FBgn0010768, sqz, squeeze, [RH, Score=179, Expect=7e-52]} {Celegans: WBGene00003015, lin-29, Transcription factor, [RH, Score=167, Expect=6e-48]} {Smed: dd_Smed_v6_18940_0_1, dd_Smed_v6_18940_0_1, [Score=255, Expect=1e-79]} {RNA1509_17051} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.628791.0]}
10. MligTC454_61294 Mlig101841.g2, Mlig065947.g2 2.18

 Int S/G2/M 

Mlig101841.g2 {REF} {Length: 537} {TRANSSPLICED} {Pfam: Transcription factor Pcc1 [PF09341.10, score=74.9]} {Smed: dd_Smed_v6_12800_0_1, dd_Smed_v6_12800_0_1, [RH, Score=55.5, Expect=2e-11]} {RNA1509_18789, RNA1509_41299}

Mlig065947.g2 {REF} {Length: 1040} {TRANSSPLICED} {Pfam: Transcription factor Pcc1 [PF09341.10, score=74.9]} {Smed: dd_Smed_v6_12800_0_1, dd_Smed_v6_12800_0_1, [RH, Score=55.5, Expect=2e-11]} {RNA1509_18789}
11. MligTC454_66175 Mlig026698.g4 2.1 Sexual_biased BRAF Mlig026698.g4 {REF} {Length: 4187} {Pfam: Protein tyrosine kinase [PF07714.17, score=199.8]; Protein kinase domain [PF00069.25, score=182.3]; Raf-like Ras-binding domain [PF02196.15, score=65.6]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.22, score=28.8]; Kinase-like [PF14531.6, score=23.7]} {Human: ENSG00000157764, BRAF, B-Raf proto-oncogene, serine/threonine kinase, [RH, Score=489, Expect=3e-160]} {Mouse: ENSMUSG00000002413, Braf, Braf transforming gene, [RH, Score=488, Expect=7e-160]} {Dmel: FBgn0003079, Raf, Raf oncogene, [RH, Score=373, Expect=2e-116]} {Celegans: WBGene00003030, lin-45, Raf homolog serine/threonine-protein kinase, [Score=342, Expect=2e-104]} {Smed: dd_Smed_v6_10148_0_1, dd_Smed_v6_10148_0_1, [RH, Score=459, Expect=1e-149]} {RNA1509_5530} {SMEDTYPE: Sexual_biased [CUFF.220291.0]}
12. MligTC454_45559 Mlig013656.g2 2.05 RTL1 Mlig013656.g2 {REF} {Length: 9890} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.1, score=104.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.27, score=102.1]; RNase H-like domain found in reverse transcriptase [PF17917.1, score=93.9]; Integrase core domain [PF00665.26, score=72.2]; Integrase zinc binding domain [PF17921.1, score=37.1]; 'Cold-shock' DNA-binding domain [PF00313.22, score=29.1]; Aspartyl protease [PF13650.6, score=22.0]; Zinc knuckle [PF13696.6, score=20.9]; Zinc knuckle [PF00098.23, score=20.8]; gag-polyprotein putative aspartyl protease [PF13975.6, score=20.4]; H2C2 zinc finger [PF09337.10, score=20.2]; Aspartyl protease [PF09668.10, score=19.1]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=99.8, Expect=4e-20]} {Mouse: ENSMUSG00000033508, Asprv1, aspartic peptidase, retroviral-like 1, [Score=50.8, Expect=9e-06]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=317, Expect=3e-94]} {RNA1509_4878}
13. MligTC454_35745 Mlig112600.g1 1.82 Mlig112600.g1 {REF} {Length: 2014} {TRANSSPLICED} {RNA1509_28528}
14. MligTC454_75037 Mlig005888.g1 1.79

 Irradiation 

 Int S/G2/M 

 Germline 

Mlig005888.g1 {REF} {Length: 1371} {TRANSSPLICED} {RNA1509_16190, RNA1509_18864, RNA1509_20970}
15. MligTC454_55379 Mlig025058.g1 1.74

 Irradiation 

 Int S/G2/M 

 Germline 

Mlig025058.g1 {REF} {Length: 3460} {RNA1509_45087, RNA1509_4854}
16. MligTC454_47908 Mlig099035.g3 1.52

 Irradiation 

Mlig099035.g3 {REF} {Length: 4385} {TRANSSPLICED} {RNA1509_49925}
17. MligTC454_76847 Mlig026251.g3 1.51 Xins SLC22A5 Mlig026251.g3 {REF} {Length: 2209} {Pfam: Sugar (and other) transporter [PF00083.24, score=75.6]; Major Facilitator Superfamily [PF07690.16, score=56.2]} {Human: ENSG00000197375, SLC22A5, solute carrier family 22 member 5, [Score=164, Expect=2e-43]; ENSG00000172940, SLC22A13, solute carrier family 22 member 13, [Score=157, Expect=4e-41]} {Mouse: ENSMUSG00000074028, Slc22a13, solute carrier family 22 (organic cation transporter), member 13, [Score=171, Expect=5e-46]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=168, Expect=4e-45]} {Celegans: WBGene00003842, oct-1, Organic cation transporter 1, [Score=150, Expect=8e-39]} {Smed: dd_Smed_v6_10903_0_1, dd_Smed_v6_10903_0_1, [Score=155, Expect=4e-41]} {RNA1509_15842} {SMEDTYPE: Xins [raj_facs_types]}
18. MligTC454_45258 Mlig061920.g6, Mlig057870.g1 1.48

Mlig061920.g6 {REF} {Length: 7011} {RNA1509_5039}

Mlig057870.g1 {REF} {Length: 6953} {RNA1509_5039}
19. MligTC454_64980 Mlig003396.g2 1.46

 Irradiation 

 Int S/G2/M 

 Germline 

Sexual_biased KLHL10 Mlig003396.g2 {REF} {Length: 3131} {Pfam: Kelch motif [PF01344.25, score=49.3]; BTB And C-terminal Kelch [PF07707.15, score=39.5]; Kelch motif [PF07646.15, score=26.5]; BTB/POZ domain [PF00651.31, score=19.1]; Kelch motif [PF13964.6, score=19.0]} {Human: ENSG00000161594, KLHL10, kelch like family member 10, [Score=68.6, Expect=2e-11]; ENSG00000114796, KLHL24, kelch like family member 24, [Score=68.2, Expect=2e-11]} {Mouse: ENSMUSG00000044938, Klhl31, kelch-like 31, [Score=83.6, Expect=2e-16]} {Dmel: FBgn0001301, kel, kelch, [Score=64.3, Expect=2e-10]} {Smed: dd_Smed_v6_1751_0_1, dd_Smed_v6_1751_0_1, [Score=54.3, Expect=2e-07]} {RNA1509_22536} {SMEDTYPE: Sexual_biased [CUFF.413753.1]}
20. MligTC454_27003 Mlig011569.g4 1.28

 Irradiation 

 Int S/G2/M 

 Germline 

Mlig011569.g4 {REF} {Length: 1799} {RNA1509_23820}
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